| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1124 |
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| Symbol | vasQ |
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| ID | 6989394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1226252 |
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| End bp | 1226746 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643379504 |
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| Product | putative type VI secretion protein VasQ |
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| Protein accession | YP_002262603 |
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| Protein GI | 209694675 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAAG ACGGATCTGT AGCGCCAAAA GAGCGCATAA ATGTGACATT TAAACCATCG
TCAGGTGATG CGGCGGAGGC ACTTGAACTT CCTTTAAAAA TGATGGTACT AGGTGATTTT
ACACTGCAGC AAGATGATCG AAAATTGGAA GATCGTAAGC CTCTCAACAT TGATAAAAGT
AACTTCAATG ATGTGATAGA AAAACAAGAT TTAAATATTG AATTTGGTGT AAAAAATCGC
CTTCAAGATG ATGAAAATGA AGAGATCCCA GTAAACCTTT CATTCAAGAA CATGACTGAT
TTTGACCCTA GCAGTATCGT AGAGCAAGTC CCTGAGCTAA AGGGATTAAT GGATTTACGC
GAGGCACTTG TTTCCCTAAA AGGTCCATTA GGTAATGTTC CTGCATTTAG AAAAGCAATT
GAAGATGCAT TAGTCAATGA CGAAGCTCGT GAAAAGCTAT TAAGTGAATT AGGTTTAGTG
ACGGAAAAGG AATAA
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| Protein sequence | MSKDGSVAPK ERINVTFKPS SGDAAEALEL PLKMMVLGDF TLQQDDRKLE DRKPLNIDKS
NFNDVIEKQD LNIEFGVKNR LQDDENEEIP VNLSFKNMTD FDPSSIVEQV PELKGLMDLR
EALVSLKGPL GNVPAFRKAI EDALVNDEAR EKLLSELGLV TEKE
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