Gene VSAL_I1098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1098 
SymbolmenF 
ID6986847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1194026 
End bp1195348 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content41% 
IMG OID643379484 
Productmenaquinone-specific isochorismate synthase 
Protein accessionYP_002262584 
Protein GI209694656 
COG category[H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1169] Isochorismate synthase 
TIGRFAM ID[TIGR00543] isochorismate synthases 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.994822 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCCACTT TTCAAGATGC CATTGAATCG ATTCGTCATC AAATCGCACA AGCAACATCA 
TCTCATACCA TTTGTATTGA CTTAGATTGG ACGGTTGGTG ATCAACTTAT TGATTGGCTT
GAAGCGCAAC CGATTTACCC TAAGTTTTAT TGGCAATCTC GTGATGGTGA AGAAGAAGTT
GCGGTGTTAG GCCAAGTGAA GACCTTTACT GACCCAAAGG CGGCGCAACA AATATTAGCG
CCTCAACAAC GAGTGTGGGG CGGGCGATCG TTTGATGGGC GTACTGAACG AAACCGTCGT
TGTATGTCTT CTTTTTTCTT TTTGCCTAAA GTTGAAATTA CGCGTTTAAA ATCATCGTGG
CATTTCATGG TCAATTTGTC AGATGATAAT TCTCGTTTAT TGTCGACGTT AGATAAGTTA
AGTGAGCAAT TTACGCCATT ATCTGAGTTG CATTGCCGTG TTCAACAACG GATCAATACG
CCTGAAAAAG AAGATTGGTC GAACATGGTC AATAAAGCGT TGACTGCCAT CTCAAATAAG
CAATTTGAAA AGGTGGTATT AGCACGAAAA ACAACACTAA CACTTGACCA ACCGTTGTCG
TCTGCACAAT TTTTAAAAGC GAGTCGTAAA GCCAATAGCC ACAGTTTTCA TTTTATGATG
GCGTTGGATA GTGAACATTG TTTTATCGGT TCAACCCCTG AGCGTTTATA TGTTCGTAAT
GGGTATGCGT TAAAAACAGA AGCGTTAGCG GGAACCATTG GTCGTGGTCA TGATGAAGAA
GAAGATGATC AACTTGCATC ATGGTTAATC TCTGACAAGA AAAACCAATA TGAAAACCGT
CTTGTGGTGG ATGATATTGT TAATCGCTTA TCTAAATTCA GTCTTTCAAT GAAGGTAGCT
GAAAAATCTG AGCTGGTTAA ATTACGTAAA GTTCAACATT TAAAACGTCC AATTTCAGCT
GAAATTAATC AAGAATGCAG TGATTCTCAA TTGCTTGATA ATTTACAGCC AACAGCGGCT
ATTGCGGGGT TACCTCGCAT GCCTGCATTG GACTTTATTA TTGATAACGA ACCTTTTGCT
CGTGGTTGGT ACAGTGGTGC CGTTGGTTTT TTAAGCCAAC AACGCAGTGA GTTTTGTGTC
GCGATCCGAA GCGCATTGGT TATGGGCAAT AAACTTCATC TTTTTGCTGG TGCAGGTATC
GTTCCTGGTT CAGAGCCAAG CAGTGAATGG GATGAATTAG ATAGAAAGAC ATCAACGTTA
TGCACCTTAT TAGAATCTGA TATTACAATG AATCCAGAAA TTACGGAGTC GCAAGTCGCA
TGA
 
Protein sequence
MSTFQDAIES IRHQIAQATS SHTICIDLDW TVGDQLIDWL EAQPIYPKFY WQSRDGEEEV 
AVLGQVKTFT DPKAAQQILA PQQRVWGGRS FDGRTERNRR CMSSFFFLPK VEITRLKSSW
HFMVNLSDDN SRLLSTLDKL SEQFTPLSEL HCRVQQRINT PEKEDWSNMV NKALTAISNK
QFEKVVLARK TTLTLDQPLS SAQFLKASRK ANSHSFHFMM ALDSEHCFIG STPERLYVRN
GYALKTEALA GTIGRGHDEE EDDQLASWLI SDKKNQYENR LVVDDIVNRL SKFSLSMKVA
EKSELVKLRK VQHLKRPISA EINQECSDSQ LLDNLQPTAA IAGLPRMPAL DFIIDNEPFA
RGWYSGAVGF LSQQRSEFCV AIRSALVMGN KLHLFAGAGI VPGSEPSSEW DELDRKTSTL
CTLLESDITM NPEITESQVA