| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1096 |
|---|
| Symbol | |
|---|
| ID | 6986845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 1191884 |
|---|
| End bp | 1192417 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643379482 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002262582 |
|---|
| Protein GI | 209694654 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0262] Dihydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.674946 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAACA GCGTATTTAT GGCAACAAGT TTAGACGGAT ATATTGCAGA TAAGAATGGC
GGTATTGATT GGTTACATAC AATACCAAAT CAAGATCAAA ATTCGATGGG GTATGTAGAA
TATTTTGACC GTATTGATGC AATGGTTATG GGACGAAATA CGCTTGATAT GGTATTAGGT
TTTGGTGTCG ATTGGCCGTA TTCCAAACCT GTTTTTGTAT TAAGCAATAC AATGACCTCC
GTCCCTGCTG GTTACGAAGA TAAAATTTTT TTAGTTAAAG GCCCATTAAA AGAGGTTATT
AAAGGTATCA ATGAGCAAGG ATTTGAACAT TTATACATTG ATGGTGGTGT GACGATTCAA
AGCTTCTTAA AAGAAGATCT GATTGATGAA ATGATCATTA CCACTATTCC GGTACTTTTA
GGTGGTGGAT CGCCTCTGTT TGGTGATTTA AACGCTCCCT TAAATTTCAA ATTCGTGAAG
AATGAGGTTT TTCTTAATGC CATCGTTCAG AATCATTTTG TGCGAGAGCG TTGA
|
|---|
| Protein sequence | MSNSVFMATS LDGYIADKNG GIDWLHTIPN QDQNSMGYVE YFDRIDAMVM GRNTLDMVLG
FGVDWPYSKP VFVLSNTMTS VPAGYEDKIF LVKGPLKEVI KGINEQGFEH LYIDGGVTIQ
SFLKEDLIDE MIITTIPVLL GGGSPLFGDL NAPLNFKFVK NEVFLNAIVQ NHFVRER
|
|---|
| |