Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1093 |
Symbol | |
ID | 6988300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1188622 |
End bp | 1189506 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643379479 |
Product | integral membrane protein |
Protein accession | YP_002262579 |
Protein GI | 209694651 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.536997 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCAAC ATCAACCAGT CCAAGGGGCA TCTTGGATGT TAACTGCGGG CCTTGCCTTT GCTATCGTTA ACAGTATTGC CCAATATTTA AGCATTAATT TTGGATTGCC TTCAACCATG GTTGCTTTGG TGCAATATGC GATTGCTTTA GTGGTTATTT TGCCTTATTT ACGCACATTA GGGATCCGAA ATTCACTAAG AACTGAATAC TTTGGTATGC ATGTTATACG TGTGTCTCTC GCCGTTGTTG GTATTCAATT GTGGCTATGG GCATTAGCCT ACCCAGTGCC TATTTGGCAG GGTATTGCAT TGTTAATGAC ATCCCCATTA TTTGCGACGA TAGGTTCAGG GCTTATTTTA AAAGAGAAAG TCGGTGTCGC TCGTTGGTGT GCAACATTAG CAGGCTTTGT TGGTGCAATG ATCATTCTTG AACCGTGGGC TGATGATTTT ACATGGGCAA CATTATTACC TGTTGGAGCT GCGTTTTTTT GGGCGTGCTA TTCATTAATG GTAAAGAAAA TGTCATCAAA AGATTCACCA TCAACCATGG TGGTGTATTT GCTGATATTG ATCACGCCGT TTAATATTTT ATTAGCGTTA CCTGAATGGC AAGTACCCAG TGATATGACG ATGTGGATGT TGTTATTTGG TGCTGGTGTC ATGACGGCGT TGGCACAATG GGCTATTGTA AAAGCATATT CAGCGGCAGA CGCGTCTTTT GTACAGCCTT TTGACCATGC CAAATTACCA TTAAATGTCT TGGCTGGTTG GATGGTTTTT GGATGGGCTC CTCCGGGACG TTTATGGCTA GGTGCTGCGA TTATTATTGC ATCGGTAGCC TTTATTACGC AGTGGGAACG TAAGAAACAG ACCGTAATTA AATAA
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Protein sequence | MSQHQPVQGA SWMLTAGLAF AIVNSIAQYL SINFGLPSTM VALVQYAIAL VVILPYLRTL GIRNSLRTEY FGMHVIRVSL AVVGIQLWLW ALAYPVPIWQ GIALLMTSPL FATIGSGLIL KEKVGVARWC ATLAGFVGAM IILEPWADDF TWATLLPVGA AFFWACYSLM VKKMSSKDSP STMVVYLLIL ITPFNILLAL PEWQVPSDMT MWMLLFGAGV MTALAQWAIV KAYSAADASF VQPFDHAKLP LNVLAGWMVF GWAPPGRLWL GAAIIIASVA FITQWERKKQ TVIK
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