Gene VSAL_I1093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I1093 
Symbol 
ID6988300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1188622 
End bp1189506 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content42% 
IMG OID643379479 
Productintegral membrane protein 
Protein accessionYP_002262579 
Protein GI209694651 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.536997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCAAC ATCAACCAGT CCAAGGGGCA TCTTGGATGT TAACTGCGGG CCTTGCCTTT 
GCTATCGTTA ACAGTATTGC CCAATATTTA AGCATTAATT TTGGATTGCC TTCAACCATG
GTTGCTTTGG TGCAATATGC GATTGCTTTA GTGGTTATTT TGCCTTATTT ACGCACATTA
GGGATCCGAA ATTCACTAAG AACTGAATAC TTTGGTATGC ATGTTATACG TGTGTCTCTC
GCCGTTGTTG GTATTCAATT GTGGCTATGG GCATTAGCCT ACCCAGTGCC TATTTGGCAG
GGTATTGCAT TGTTAATGAC ATCCCCATTA TTTGCGACGA TAGGTTCAGG GCTTATTTTA
AAAGAGAAAG TCGGTGTCGC TCGTTGGTGT GCAACATTAG CAGGCTTTGT TGGTGCAATG
ATCATTCTTG AACCGTGGGC TGATGATTTT ACATGGGCAA CATTATTACC TGTTGGAGCT
GCGTTTTTTT GGGCGTGCTA TTCATTAATG GTAAAGAAAA TGTCATCAAA AGATTCACCA
TCAACCATGG TGGTGTATTT GCTGATATTG ATCACGCCGT TTAATATTTT ATTAGCGTTA
CCTGAATGGC AAGTACCCAG TGATATGACG ATGTGGATGT TGTTATTTGG TGCTGGTGTC
ATGACGGCGT TGGCACAATG GGCTATTGTA AAAGCATATT CAGCGGCAGA CGCGTCTTTT
GTACAGCCTT TTGACCATGC CAAATTACCA TTAAATGTCT TGGCTGGTTG GATGGTTTTT
GGATGGGCTC CTCCGGGACG TTTATGGCTA GGTGCTGCGA TTATTATTGC ATCGGTAGCC
TTTATTACGC AGTGGGAACG TAAGAAACAG ACCGTAATTA AATAA
 
Protein sequence
MSQHQPVQGA SWMLTAGLAF AIVNSIAQYL SINFGLPSTM VALVQYAIAL VVILPYLRTL 
GIRNSLRTEY FGMHVIRVSL AVVGIQLWLW ALAYPVPIWQ GIALLMTSPL FATIGSGLIL
KEKVGVARWC ATLAGFVGAM IILEPWADDF TWATLLPVGA AFFWACYSLM VKKMSSKDSP
STMVVYLLIL ITPFNILLAL PEWQVPSDMT MWMLLFGAGV MTALAQWAIV KAYSAADASF
VQPFDHAKLP LNVLAGWMVF GWAPPGRLWL GAAIIIASVA FITQWERKKQ TVIK