| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1085 |
|---|
| Symbol | dnaX |
|---|
| ID | 6988243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 1180101 |
|---|
| End bp | 1182245 |
|---|
| Gene Length | 2145 bp |
|---|
| Protein Length | 714 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643379472 |
|---|
| Product | DNA polymerase III subunits gamma and tau |
|---|
| Protein accession | YP_002262572 |
|---|
| Protein GI | 209694644 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
|---|
| TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTATC AAGTTCTGGC ACGTAAATGG CGACCACATC ATTTTAAAGA TGTTGTTGGT
CAATCCCATG TGCTTACGGC GTTGGAAAAC GCGCTTGACC ATAATCGACT TCATCACGCT
TACTTATTTA GTGGCACTCG CGGTGTGGGT AAAACTACTA TTGCTCGTTT GTTCGCTAAA
GGACTAAACT GTGAAGAGGG GATTACATCA ACACCTTGTG GCGTGTGTTC TACCTGTAAA
GAAATTGATG AAGGACGATT TGTCGATTTA CTTGAGATTG ATGCCGCTTC TAGAACCAAA
GTAGAAGATA CTCGTGATCT ATTAGATAAC GTTCAATATA AACCTGCGCG TGGTCGTTTT
AAGGTTTATT TGATCGATGA AGTTCACATG CTATCGCGAC ACAGTTTCAA TGCATTATTA
AAAACATTGG AAGAGCCGCC AGAATACGTC AAATTCATAT TAGCCACGAC CGATCCACAA
AAACTGCCTG TGACGATTTT ATCTCGTTGC TTACAGTTTC ATCTGAAACA CATCAGTGTT
GATCAAATTC ATGCGCAATT AGATCTCGTT TTAGACAAAG AAGAAGTGTC TAAAGATGGA
AGAGCGTTAG GGCTGATAGC TCATGCGGCA GATGGCAGTA TGCGTGATGC ATTAAGTTTG
ACCGATCAAG CGATTGCGTT AGGTAATGGT AATGTAACTG CTGATATTGT GTCTATGATG
TTGGGTACGT TAGATACCGA TCAAGCGATT CGTATTCTAG AAGCGATCAG CACAAAAAAC
ATGCAAACGC TGATGAGCTG TATCAATGAT TTAGCAGATA TTGGTGTTGA GTGGGATGGG
TTAGCAAAAG AAATTGCGGC ACAACTGCAT AAATTGGCGA TGTACCAAGC GTTACCTGCA
ACGTTAGATA AAACTCAACC GGATGCTGAG AGAATTGAAT TATTGAGTGG TCAGTTATCG
CCACAAGAAG TTCAATTGTT CTACCAAATT GCATTGCAAA GCCGTAATGA TTTACCTTTA
GCCCCAACCG AAAAAACGGG CGTAGAGATG ATGTTATTGC GTATGGTCGC ATTTCGTCCT
GTGCATGCTC AAGCAATAGA GGCATTACCG ATTGCCGTGC CTAGCATGGA ACCTGCTGCC
GTAAATGTTG CACCTCAACA ACCTGCGCCA GCCTCTAGAG TTCAGCAAGT TATTGCATCA
GCTCCAAATG CTGAAGTGCC TGTTGCTCCT AAGCCAATGC AACCGCAAGC AGTATCTCAA
ACGGTGTATT CTCCGGTTTC TAATTCGCAA CAATCGAGTT CAGCACCGTT AGATTCTACA
GAGGCTCAAC CGCCAGTATA TGATGCACCA CCAATGGGGG AATCATCACA ATCTGATTCC
GCACCAGTGC AAAATATACC TCAAGAGCCT ATAGCAACCC CAAGAAGTGG GTTGTTAGGT
GTGCGTAATC AATTACGTAG TGCAAAAAAT AATTTATCAA ATACAACCAC CGGTACTAGC
CCAAAAAAGG GTAGTGCGGC ATCCGATAAG AAAAAAACGA GCTCAGTGTT AGAACGTATT
GCTGAAAAGC AACATCTCGC TCCTCGTACT CAGGTGTCGC AACTTGGAAC GTCTGTTTCT
CAAGAGAAAA AGCCAGAAGA ACCATACCGT TGGAAAGCCA GCCAGCCTGA AGTGAAAAAA
GTAGTGAGTG ATATTACTCC TACGAAATTA AAGCAGGCAC TTGAACATGA AAAAACACCT
GAGATGGTTC AAGAACTTGT TGATGAAACA GTAAAGCAAG ATACGTGGTC TGCATTAGCG
ATGTCATTAG CGTTGCCTAA ATTGGTACAA CAACTTGTAT TGAATTCTTC TTTTGAAGAA
CATGACGATC AGGTTTCATT GCATTTACGT TCTGCACAAT CACATTTAAT TAATGACAAG
GCGCATGAAT TGGTTAGCCA AGCGTTAAGC TCTGCTCTAA ACAAAGAGAT TAAATTAAAC
ATTGATATTA GTGCAGAAGG TACAAGCCCG TTAGAGTTAC GTGAGCAAAT GTATCAAACT
AAATTACAGA CGGCATACCA GAGCTTGCAA CAAGATCCTC ATGTTAATTT CTTTATGCAG
CGTTACGGTG CAGAAATAGA TCAAGAAAGC GTGAGACCAA TTTAA
|
|---|
| Protein sequence | MSYQVLARKW RPHHFKDVVG QSHVLTALEN ALDHNRLHHA YLFSGTRGVG KTTIARLFAK
GLNCEEGITS TPCGVCSTCK EIDEGRFVDL LEIDAASRTK VEDTRDLLDN VQYKPARGRF
KVYLIDEVHM LSRHSFNALL KTLEEPPEYV KFILATTDPQ KLPVTILSRC LQFHLKHISV
DQIHAQLDLV LDKEEVSKDG RALGLIAHAA DGSMRDALSL TDQAIALGNG NVTADIVSMM
LGTLDTDQAI RILEAISTKN MQTLMSCIND LADIGVEWDG LAKEIAAQLH KLAMYQALPA
TLDKTQPDAE RIELLSGQLS PQEVQLFYQI ALQSRNDLPL APTEKTGVEM MLLRMVAFRP
VHAQAIEALP IAVPSMEPAA VNVAPQQPAP ASRVQQVIAS APNAEVPVAP KPMQPQAVSQ
TVYSPVSNSQ QSSSAPLDST EAQPPVYDAP PMGESSQSDS APVQNIPQEP IATPRSGLLG
VRNQLRSAKN NLSNTTTGTS PKKGSAASDK KKTSSVLERI AEKQHLAPRT QVSQLGTSVS
QEKKPEEPYR WKASQPEVKK VVSDITPTKL KQALEHEKTP EMVQELVDET VKQDTWSALA
MSLALPKLVQ QLVLNSSFEE HDDQVSLHLR SAQSHLINDK AHELVSQALS SALNKEIKLN
IDISAEGTSP LELREQMYQT KLQTAYQSLQ QDPHVNFFMQ RYGAEIDQES VRPI
|
|---|
| |