Gene VSAL_I1084 details

Gene Information

• Locus tag: VSAL_I1084
• Symbol: apt
• ID: 6986837
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 1179452
• End bp: 1179997
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643379471
• Product: adenine phosphoribosyltransferase
• Protein accession: YP_002262571
• Protein GI: 209694643
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
• TIGRFAM ID: [TIGR01090] adenine phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.954514
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTACAG AAACATTAGA ACTTATCAAA AATAGCATTA AATCTGTTCC TGATTATCCA 
AAAGCAGGCA TCATGTTCCG TGATGTTACA AGCTTGATGG AAGATCCAAA AGCTTACCAA 
GCAACGATTC AGTTATTGGT TGAAAAGTAC AAGCAAGGTG GTTTTACCAA GATCGTTGGA 
ACTGAAGCTC GTGGTTTCTT ATTTGGTGCT CCTTTGGCAC TAGAATTAGG TGTTGGTTTT 
GTCCCAGTTC GTAAACCGGG TAAATTGCCA CGTCCAACGA TTGCACAAAC GTATGATCTT 
GAATACGGAA CAGATACGTT AGAAATTCAC ACAGACGCAA TTGTTGAAGG TGATAAGGTT 
CTTGTTGTTG ATGATTTACT TGCAACTGGC GGAACCATCG AAGCAACAGT GAAACTTATT 
CGCCAACTTG GTGGTGATGT TCAGCACGCT GCATTTGTTA TCAACCTTCC AGAAATTGGT 
GGTGAAACGC GTTTAGAAGG CTTAGGTCTA AACGTGTACA GTATTTGTGA GTTTCCTGGT 
CACTAA 

 

Protein sequence

MSTETLELIK NSIKSVPDYP KAGIMFRDVT SLMEDPKAYQ ATIQLLVEKY KQGGFTKIVG 
TEARGFLFGA PLALELGVGF VPVRKPGKLP RPTIAQTYDL EYGTDTLEIH TDAIVEGDKV 
LVVDDLLATG GTIEATVKLI RQLGGDVQHA AFVINLPEIG GETRLEGLGL NVYSICEFPG 
H