| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1081 |
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| Symbol | aphB |
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| ID | 6989038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1176715 |
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| End bp | 1177590 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643379468 |
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| Product | transcriptional regulator AphB |
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| Protein accession | YP_002262568 |
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| Protein GI | 209694640 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTAG ATGATTTAAA TTTGTTTCGA CAAGTAGTGG ATAATGGCAG CTATACTGCA
GCATCAAGAA AGACTCTAAT CCCTGTTGCA ACAATTACTC GTCGCATTCA AGCCTTAGAA
GATTCCTTAG ATATTCGCCT TCTCAACCGC CATGCAAGAA AACTGTCTCT CACCGAATCT
GGTCAAAAAT TTTATGACGA ATGTTCTCCA ATTCTGTCTA ACTTAGTTAA TATCAGTGAA
TATTTGAGTG AAGAGTGTCG TGGTGCCGCT GGGAAACTTA ATATTGCGGC TCCCTCTAAT
TTAACAAAAC GCATGATACA GCCTATTTTA AATCAATTTA TGCTGATTTA TCCTAATATT
AATATCAACC TAACCATGAG CAACCAACCT GAGCAGCTAG ACCCAACGGA TTGGGACATT
ATTTTCAGAG TTGGAAAACA ACGTGACTCA TCTCTTATTG CTCGCCAAAT TGGTTCATTA
GAAGATATTT TAGTCGCTAG CCCTATTTAC TTAGAGCAAC GTTCTGAACC GACTCATGCG
CAAGAATTAC ATGACCACAG CTTATTGAAA GGCCATCCAT TAATGCGCTG GCGCTTAACT
AACATTGAGG GTGAATCTGT AACGATTACT GATGCGGGTC GTTTTGAAGC CAGTGAGCTT
AATGTTATTC GCATGGCTTG TTCTGATGGC TTAGGCATTA CGTTAATGCC TGATATTATG
ATCAGTAAGT ACCTTGAAGA CGGTTCATTA GTTCGCGTAT TAAAAGATTG GTCAGCCAAC
CCTAGAGACA TTTACATGAT CTATAACTAC AAAGATCATC AGCCTGAAAA AGTACGATTA
TTCATTGATT TTGTTAGTAA TCATATTCCA AAATAA
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| Protein sequence | MKLDDLNLFR QVVDNGSYTA ASRKTLIPVA TITRRIQALE DSLDIRLLNR HARKLSLTES
GQKFYDECSP ILSNLVNISE YLSEECRGAA GKLNIAAPSN LTKRMIQPIL NQFMLIYPNI
NINLTMSNQP EQLDPTDWDI IFRVGKQRDS SLIARQIGSL EDILVASPIY LEQRSEPTHA
QELHDHSLLK GHPLMRWRLT NIEGESVTIT DAGRFEASEL NVIRMACSDG LGITLMPDIM
ISKYLEDGSL VRVLKDWSAN PRDIYMIYNY KDHQPEKVRL FIDFVSNHIP K
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