| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1075 |
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| Symbol | truA |
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| ID | 6986834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1170713 |
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| End bp | 1171501 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643379462 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_002262562 |
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| Protein GI | 209694634 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGAATAG CTTTATGTAT TGAGTACGAT GGTGCCAGTT ACCACGGTTG GCAGTCCCAA
AAAGACGTAA CAAGTGTTCA AGAAGAATTA GAAAAAGCCT TAATGGTCGT TGCTAATGAA
CCGATTGAGG TTATGTGTGC AGGTCGAACG GATGCTGGCG TACATGGAAC AGGTCAAGTA
GTACATTTTG ATACAAATAG CGTGCGTAAA TTGCCAGTGT GGATGGTAGG GGTGAATGCT
AACCTACCAA AAAATATTGC GGTTCGTTGG GTTAAAGAAG TAAACGAAGA TTTTCATGCT
CGTTTTACTG CTACCGCGCG ACGTTATCGT TATATTATTT TTAATAATCG TCAACGCCCA
GCCATTTTTA GTCATGGTGT TAGTCATTAT CATGAAACAC TTGATGCTGA TTTAATGCAT
GAAGCTGGCC AGTATCTACT GGGAGAGAAT GATTTTACGT CTTTTAGAGC GGTTCGCTGT
CAGTCACGTA CCCCTTGGCG TAATTTAATA CACTTAAAAG TAACGCGTCA TGGCGATTTT
ATTGTTATTG ATATTAAAGC GAATGCCTTT GTTCATCATA TGGTCCGAAA CATTACAGGT
AGCCTAATCG AAGTGGGCAG AGGCAAGCAA AAACCTGAGT GGGTACAGTG GTTACTAGAA
GCGAAAGACC GTAAGCTAGC AGGAGCAACA GCAAAAGCTG AAGGATTATA TCTTATTGAT
GTTGATTACC CTAAAGAGTG GGATTTGCCT AGAGTTCCGT TAGGGCCTTT ATTTTTACCA
GATAATTGA
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| Protein sequence | MRIALCIEYD GASYHGWQSQ KDVTSVQEEL EKALMVVANE PIEVMCAGRT DAGVHGTGQV
VHFDTNSVRK LPVWMVGVNA NLPKNIAVRW VKEVNEDFHA RFTATARRYR YIIFNNRQRP
AIFSHGVSHY HETLDADLMH EAGQYLLGEN DFTSFRAVRC QSRTPWRNLI HLKVTRHGDF
IVIDIKANAF VHHMVRNITG SLIEVGRGKQ KPEWVQWLLE AKDRKLAGAT AKAEGLYLID
VDYPKEWDLP RVPLGPLFLP DN
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