| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1071 |
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| Symbol | fabB |
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| ID | 6986833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1163084 |
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| End bp | 1164295 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643379458 |
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| Product | 3-ketoacyl-ACP synthase FabB |
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| Protein accession | YP_002262558 |
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| Protein GI | 209694630 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.791562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAG CCGTAATTAC AGGCATGGGC ATTGTTTCAA GTATCGGTAA CAATGTTGAA
GAAGTATTAG AATCTCTGAA AGCGGGTAAA TCAGGCATTA ACTTCTCTGA GCAGTTCGCC
GAAAAAGGCC TGCGCAGTAA TGTTTGGGGC AATTTGAAAA TGAACCCAGC GGATCACATT
GATCGCAAAA AAATGCGTTT TATGGGTGAT GCGGCTGCAT TTGCTTACAT TTCAATGGAG
CAAGCAGTAG CGGATTCTGG CTTAACTGAA GATCAAGTTT CAAATGATCG TACCGGTATT
GTTGCAGGTT CTGGTGGTGC ATCATCACTA AACCAAGTGA ATGCAGTGGA TATCTTGCGT
GAAAAAGGCG TTAAGCGTGT TGGACCATAT ATGGTTCCTC GTACAATGGC TTCTACAGTA
TCGGCGTGTC TTGCAACTCC GTTTAAAATT CGCGGTGTTA ACTACTCAAT GAGTTCTGCA
TGTGCAACGT CTGCGCACTG TATTGGTCAC GCGGTAGAGC TTATTCAATT AGGCAAACAA
GACGTAATGT TTGCTGGTGG TGGTGAAGAG CTAGATTGGT CTTTAACGAT GATGTTTGAT
GCGATGGGCG CACTATCATC GAAATACAAT GACACACCAG ATAAAGCATC TCGTACGTAC
GATACAGACC GTGATGGTTT TGTTATCTCT GGCGGCGGCG GCATGGTTGT TATTGAAGAA
CTTGAACACG CATTAGCTCG TGGCGCAAAA ATCTACGGTG AAGTCGTTGG TTACGGTGCA
ACATCAGACG GCTACGACAT GGTAGCTCCG TCAGGTGAAG GCGCAGTTCG TTGTATGAAA
ATGGCGATGC AAAATGTAGA CAGTGTTGAT TACGTGAATA CTCACGGTAC ATCAACGCCT
GTTGGTGACG CGAAAGAGCT AGGCGCTATC CAAGAAGTCT TTGGTACCAA TAGCCCAGCA
ATTTCTGCAA CTAAAGCAAT GACTGGTCAC GCACTAGGTG CGGCGGGTGT TCATGAAGCT
ATTTATTCAA CATTAATGTT AGAGCACGGT TTTATCGCGC CAAGCATCAA TATTGAAACC
TTAGATCCTG CTGCTGAAGG CCTTGATATC GTGACTGAAA AACGTGATCA AGAACTAACA
ACGGTAATGT CTAACAGCTT TGGCTTTGGT GGCACAAACG CAACGTTAGT AATTAAGAAA
TTCGAAGCAT AA
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| Protein sequence | MKRAVITGMG IVSSIGNNVE EVLESLKAGK SGINFSEQFA EKGLRSNVWG NLKMNPADHI
DRKKMRFMGD AAAFAYISME QAVADSGLTE DQVSNDRTGI VAGSGGASSL NQVNAVDILR
EKGVKRVGPY MVPRTMASTV SACLATPFKI RGVNYSMSSA CATSAHCIGH AVELIQLGKQ
DVMFAGGGEE LDWSLTMMFD AMGALSSKYN DTPDKASRTY DTDRDGFVIS GGGGMVVIEE
LEHALARGAK IYGEVVGYGA TSDGYDMVAP SGEGAVRCMK MAMQNVDSVD YVNTHGTSTP
VGDAKELGAI QEVFGTNSPA ISATKAMTGH ALGAAGVHEA IYSTLMLEHG FIAPSINIET
LDPAAEGLDI VTEKRDQELT TVMSNSFGFG GTNATLVIKK FEA
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