Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1066 |
Symbol | minD |
ID | 6988807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1157829 |
End bp | 1158641 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643379453 |
Product | septum site-determining protein MinD (cell division inhibitor MinD) |
Protein accession | YP_002262553 |
Protein GI | 209694625 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG2894] Septum formation inhibitor-activating ATPase |
TIGRFAM ID | [TIGR01968] septum site-determining protein MinD |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00857839 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACGTA TTGTCGTTGT GACTTCTGGT AAGGGTGGCG TAGGTAAAAC TACTTCCAGC TCTGCCATTG CATCGGGGCT TGCTCTGGCT GGCAAGAAAA CCGCGGTAAT TGATTTTGAT ATTGGCTTAC GTAATCTTGA TTTAATCATG GGTTGTGAAC GTCGCGTTGT TTACGATTTT GTTAATGTTA TTAATGGTGA AGCAACGCTA AACCAAGCAT TAATTAAAGA TAAGCGCGTA GGTAATTTAT TTATCCTTCC TGCGTCTCAA ACTCGTGATA AAGATGCATT AACCAAAGAA GGCGTTCGTC GTGTTCTTGA TGAGTTAATC GCAATGAACT TTGATTTCAT TATTTGTGAT TCTCCAGCAG GTATTGAAGC TGGCGCATTA ATGGCGTTAT ATTTTGCGGA TGAAGCCATC ATTACCACAA ACCCTGAAGT ATCATCTGTT CGAGATTCTG ACCGCATTTT AGGTATTTTA GACTCTAAAT CTCACCGTTC AGAAGAAGCT TTAGAGCCAG TAAAACAACA CCTATTATTA ACTCGCTATT GCCCAACACG TGTAAATCAA GGCGAAATGT TAAGTGTGGG TGATGTTGAA GAAATTCTAA ATATCCCTCT ATTGGGTGTG ATTCCAGAAA GCCAATCAGT ATTGAATGCA TCAAACAAAG GTGTACCAGT AATTTTTGAC GAAGAATCAA ACGCAGGCTC TGCATACCAA GATGCAGTTG ACCGTCTGTT AGGCAAGGAA GTTTCGTTCC GCTTCTTAGA AGAAGAGAAG AAAGGTATCT TTAAACGACT ATTTGGAGGT TAA
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Protein sequence | MARIVVVTSG KGGVGKTTSS SAIASGLALA GKKTAVIDFD IGLRNLDLIM GCERRVVYDF VNVINGEATL NQALIKDKRV GNLFILPASQ TRDKDALTKE GVRRVLDELI AMNFDFIICD SPAGIEAGAL MALYFADEAI ITTNPEVSSV RDSDRILGIL DSKSHRSEEA LEPVKQHLLL TRYCPTRVNQ GEMLSVGDVE EILNIPLLGV IPESQSVLNA SNKGVPVIFD EESNAGSAYQ DAVDRLLGKE VSFRFLEEEK KGIFKRLFGG
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