| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1025 |
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| Symbol | |
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| ID | 6986794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1121868 |
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| End bp | 1122902 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643379411 |
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| Product | phage portal protein |
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| Protein accession | YP_002262514 |
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| Protein GI | 209694586 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5518] Bacteriophage capsid portal protein |
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| TIGRFAM ID | [TIGR01540] phage portal protein, PBSX family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAGC AAGCAAACAC TTTAGTAACA CAAGATAAAC CAAAAGACGA TTCGGTTTAT
CATATCGACT CATCACCCGA GGCTGTTGAT GCAAGCAGTT GGATGACTTC ATACTCTGAT
TTGTTTTATA ACGAGTTTGA TGATTATTGG GAGCCGCCAA TCTCGCGCCA AGGGCTATCT
GATACCTCAC GCGCTAACGC TTATCATTGC TCACTGCTTA GGGCTCGAGC TAATTATGTA
TCTGCACGCT TTGAAGGTGG CGGCGGCTTA ACACGTCGAC AACTTCAATT TTATTGCAAT
AATTACTTTA CCTTTGGTGA TGTGGCATTT TTAAAAATAC GCAATGGCTT TGGTGTGCCG
GTTCGCCTCT TCCCTTTACC AAGTATGCAT TTACGTAAAC GTAAAAATGG AGACTTTGCC
CTTCTTGAGC GAGATGGCAA ACAACGCACT TACAAAGCAA AAGACGTTAT CTTTTTGGCT
CAAGATGATT TACAGCAACA AGTTTACGGC CTGCCTGATT ATTTAGGCAG CTTACAAAGC
AGTTTGTTAA ATAAAGATGC CACGTTATTC CGTCGTCGTT ACTTCAAGAA CGGCGCACAC
ATGGGCTTTA TCTTTTACGC TTCGGATCCC AACTTAAGCG AAGAAGATGA AAAGAAAATG
AAAGAGACCA TTGCCAGCTC TAAAGGCGTG GGGAACTTCC GTAGTATGTT TGTGAATATT
CCGAACGGTA AAGAGAAAGG CATTCAATTA ATTCCGGTTG GCGACATTGC CACTAAAGAC
GAATTTGAGC GAATTAAAAA CATTACCGCT CAAGATATTC TTGTTGGCCA TCGAGTACCG
GCAGGCAAAG GGGGCATAAT GCCGCAACCT GGTTCTAGTT TTCCTGACCC TGAAAAAGTA
GGTCGTGAAT ACGATAAAGA CGAGGTTATC CCTGTTTGTA AATTAATTAT GGATGAAGTG
AACAACGACC CTGAAATCAT CCACCGTAAA CATTTACATT TACGCTTTAA CATTGACATA
GAAAAGACCG CTTAA
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| Protein sequence | MTEQANTLVT QDKPKDDSVY HIDSSPEAVD ASSWMTSYSD LFYNEFDDYW EPPISRQGLS
DTSRANAYHC SLLRARANYV SARFEGGGGL TRRQLQFYCN NYFTFGDVAF LKIRNGFGVP
VRLFPLPSMH LRKRKNGDFA LLERDGKQRT YKAKDVIFLA QDDLQQQVYG LPDYLGSLQS
SLLNKDATLF RRRYFKNGAH MGFIFYASDP NLSEEDEKKM KETIASSKGV GNFRSMFVNI
PNGKEKGIQL IPVGDIATKD EFERIKNITA QDILVGHRVP AGKGGIMPQP GSSFPDPEKV
GREYDKDEVI PVCKLIMDEV NNDPEIIHRK HLHLRFNIDI EKTA
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