Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I1020 |
Symbol | |
ID | 6986789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1116746 |
End bp | 1119259 |
Gene Length | 2514 bp |
Protein Length | 837 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643379406 |
Product | phage replication protein |
Protein accession | YP_002262509 |
Protein GI | 209694581 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGC TTACATTTAC CCCTCAAGAA CAACGTGCAG CCACTAAAGC TTGTTTAAGC TTTGGTGGTT TGTGCGTATT CCCTCAAAAG CCAAAAGCGA TTCAAGCGCC TTATTCTCAA GTAAGCTTTG AAACACCAGA GCCTGAGAAC ATGACAGTTA TCGAGCGCAA TTTATATTCG GTCGATAAAG TTGATCATGA ATGGCGCAAG CAATTCTTTG CTGATTTACC TTCTTACTTA AGCAAGTACT TTGCTGATCG CTATATTGCC ATTTTCAAGA AAAAAGGCCG AGCAGAGGCA AATACTTATC TACGTGAAAG AATGGGTGGA GAGCTGCAAC GCCGTGTAAG TTTAGTGTTG TACCGTTACC GCCAATTGCC AACCTACAAT AAAATCAAAT TGATGAGCGA AGATGAAGAC GCTGACCAAT GTGATTTTGA TGCTACGCCA AAAGAAGGCC AACTACAGTT TGATCTAGAA AAGGTCGAAA TCAAAAAGCC AAAGTCTCGC CTACTTGCCG AAATGGAATT AGACGAGTTA AAAGACATGG CGTTTAAAAT ATCTCAAATC ATGAATCGCC GCTTTAATCT GCTAAATAAA AAATACGCAG GCGAAACAGA CCAAGAAATA AATGAAGGTT TACTTAATAT TTATGACGAG CTGGCAGAGT TAACGTTATC TTTTGGCTTT GCTGCGCCTT GCACAAAGAA AAATCCAAAA ACCAGAATAG CCCAAGATGT TTACGGCGAT ATTTTCCGTA TGTTGGATGA GAAGTTTTGG TTAACGAGCC TTAAAAAAGC AAGAAAGATA ATGCGTGAGC ACTTGGCCAT TGCTATGGGG CAGGTGTCTA AACGCGCCTC TGCATATTGC TCTTATGATT GCGTTCGTGA GCATAAAGAA CAGCAAAGAA AGAATTGGGA ATACATTCAA AACCAAATCT TGGTTGATGA TGAAACCCAA GAAGAATGCA GCATGGAAGA CATGGTGTTA AAAAGCGTGT CTAACCCTGC TATTCGTCGT CATGAATTAA TGACTCGCAC GCGTGGCTGT GAAAACATCG CCGAAGAAAT GGAGCTATGC GGTTTATTCT TAACATTAAC CGCACCAGGT AAATATCATA ATAGTTACCA ACGTGGCGGT TTTATTGAAC ACTGGAATGG CTCAAGCCCT CGTGATGCAC AAGTGTATTT AAACGGAGTT TGGTCACGTA TTCGCGCTAA GTTAGGCCGT GAAGAGTTTC GTTGGTTTGG TATTCGTGTT GCAGAGCCGC ATCACGATGG CACACCACAC TGGCATTTAC TTCTATGGTG CAAGCCAGAA GAAAAAGAAG CCATTACTAA AATATTTATT GATTACGCAA CAAAAGAAGA CAAGCACGAG CTAATGAAAA AAGGCGTGTT TGATTATTCT GCACGTTGTG ACATTAAAGC TATCGACTCA GAGCAAGGTT CAGCAACGGG CTATATTGCC AAGTATATTT CTAAAAACAT TGACGGCTAT AAAATGGATG ATGAAGTTTC AGACGAAACG GATAAACCAA TTAAAGATAT GGCTAAAAAT GTAACAGCGT GGAAAAGTCG CTGGTGTATT CGTCAATTTC AATTTATTGG CGGCGCACCG GTTACCACTT ACCGCGAACT TCGTCGTTTA GCAAATCTTG ATAAAGCGTC ATACATGGAT TTCTTACACA GTCAAAAACG TGAAGAGTTA TTGACTGTGT ACCGTGACAT GACCGCTAAC GATATGGGTC CGCATCTACC AAGTATCATG CTAACCAAAT CAGTCATTAT GAAGCGTTTG GGTGATGCGT ATAAACCAAC CATTAAGCAC GAGAACAACA GCGTGGTCGC TACGATGCAA TCAGCCGACG AAGGTAATTG GCAAGGTTAC ATCATGGGCC AAGGCGGTCC ATTTGTTAAA CGCGCTCAGT TAATGGTTCG TAACGCTTAT GAAGAACTGC CGTTTTCGTC TCGCTACTCT GAAACCATTC GTAAGATAGA AGGTATTTTT GCGGCGGGTG AGTTTATTAA AACTCGCGTA AGAAAGTGGA CAATTCAAAA CAAACCTAAA GTTGTAACTG AACTTGAAGC GGGGGCTCTT GCTCTTGATG GCAGCGCAGC TGCTCCTTGG AGTTCTGTCA ATAACTGTAC GCGCGATCTC AAAGAGAGCC GCAAAGGACA GGTTAGCGAT AAGCTATCTA CTTTGTTAAC GCCTTTGGGT AAAAAACCAG AATCCCTTGA TGAACATGCA CTTAATGCCT TTATGAAGGG CAGCACTTTA AACCTTCATG ATGGTAGAAA AGTAAAATTA CGCTCAGGTT ATGTGGATAT GGACGGCAAC GTTCGTCAAC CAGAGCTAAT TGAAATAACA AAAGAGCCAG AAAACTTAAG TTGGCTTGAT TTTGAAGGTT GGCCAGACGC CCCAACCGAC ACCAATTCAA ACGAATATCA ACAACCAGAC CTTTCAATCT TCCCAGACTG TGATTTTGGT GACGATGAAT GGCCGTTAGT GTGA
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Protein sequence | MAKLTFTPQE QRAATKACLS FGGLCVFPQK PKAIQAPYSQ VSFETPEPEN MTVIERNLYS VDKVDHEWRK QFFADLPSYL SKYFADRYIA IFKKKGRAEA NTYLRERMGG ELQRRVSLVL YRYRQLPTYN KIKLMSEDED ADQCDFDATP KEGQLQFDLE KVEIKKPKSR LLAEMELDEL KDMAFKISQI MNRRFNLLNK KYAGETDQEI NEGLLNIYDE LAELTLSFGF AAPCTKKNPK TRIAQDVYGD IFRMLDEKFW LTSLKKARKI MREHLAIAMG QVSKRASAYC SYDCVREHKE QQRKNWEYIQ NQILVDDETQ EECSMEDMVL KSVSNPAIRR HELMTRTRGC ENIAEEMELC GLFLTLTAPG KYHNSYQRGG FIEHWNGSSP RDAQVYLNGV WSRIRAKLGR EEFRWFGIRV AEPHHDGTPH WHLLLWCKPE EKEAITKIFI DYATKEDKHE LMKKGVFDYS ARCDIKAIDS EQGSATGYIA KYISKNIDGY KMDDEVSDET DKPIKDMAKN VTAWKSRWCI RQFQFIGGAP VTTYRELRRL ANLDKASYMD FLHSQKREEL LTVYRDMTAN DMGPHLPSIM LTKSVIMKRL GDAYKPTIKH ENNSVVATMQ SADEGNWQGY IMGQGGPFVK RAQLMVRNAY EELPFSSRYS ETIRKIEGIF AAGEFIKTRV RKWTIQNKPK VVTELEAGAL ALDGSAAAPW SSVNNCTRDL KESRKGQVSD KLSTLLTPLG KKPESLDEHA LNAFMKGSTL NLHDGRKVKL RSGYVDMDGN VRQPELIEIT KEPENLSWLD FEGWPDAPTD TNSNEYQQPD LSIFPDCDFG DDEWPLV
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