| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1001 |
|---|
| Symbol | |
|---|
| ID | 6986772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 1105138 |
|---|
| End bp | 1106331 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643379388 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_002262491 |
|---|
| Protein GI | 209694563 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGCAT ATAAACCCCT GAAACAATTA TTTAATAGTC AAAATAACTG GCTTAAATTT
CTTCATAATA ACAAAGCTAA CCTAAGAGCG GTCGTGATTG AAAATGTCAC AAAGATGCTG
TCCTGTGGGA CAGCGGCTTT TGGCTCTCGC GAATATCATT GTTGCAACCC TGACTGTACC
CATATCAAAT ATATTCACCA AACCTGTAAA TCTCGAGCGT GCAGTAGCTG TGGCATGAAA
GCCACAGAGC GATGGATACA AAAGCAACAA CATGTCTTCC CTGAATGCGA ATATCAACAC
ATCACCTTTA CCCTTCCAAA CACGCTATGG CCTATCTTTC GTCATAACCG TTGGCTGTTA
AATAAATTAT TCAAATGTGC TGCAAACATT CTGCTGGGAT GGGCAAAAGA TAAAGGAATA
GATGTCGGTA TCTTTTGTGC TCTTCATACT TACGGTCGAA AACTGAATTG GAATACGCAC
TTACATTTAT CGGTCACTCG TGGGGGAATT TGTGAACGTA CCGGTTTATG GAAACCCATT
TACTTCCAAA TGAAAACGAC AGAGCCTTGT TGGAGAGCGG CTATCGTCAG TTTATTGGGT
AAGGCTTATT ATGAGCTTGA TTTATCAAGC GAAGAATGCC CCTATATCCG TAATAAAACG
GATTGGTCAC GCTTTTTAAG CAGTCAATAT AATCGTCGTT GGAAGCTTCA TTTTGCTAAA
AAGACAAATA ATGTAAAACC GACGATGAAC TATCTTGGTC GGTATTTAAA ACGGCCCCCA
ATTTCAGCGT CACGTTTAAG TCATTACGCC AAAGGCGGAA TGATAACGTT TAATTATTTA
GACCATCGAA CAGGAACAAC AGACAGCCTA ACATTATCAC CAGAAGAGAT GATAAGACGG
ATAGTAGAGC ACTATCCTGA TAAACATTTC AAGATGATCC GATACTACGG TTTTTTATCA
ATGCGTCGTC GTGGAGAAGC TCTGCCTAGA GTTTATGCAG CTTTAGGTAT GACAATAGAA
GCTGAGCCGA AAATGCCAGG GTATGCCGCA ATGTTAAAAG GATATGTAAA AGTAGATCCG
TACGAATGTA TTTTATGTGA AAGTCGTCTG GTGTTTACGA ATTTCCGAGT CGGAAATTCG
GTCAATGATT TAGTCACCCA TGCGATAGTT CAGTCAGAAT TGAGGGCAGC ATAA
|
|---|
| Protein sequence | MHAYKPLKQL FNSQNNWLKF LHNNKANLRA VVIENVTKML SCGTAAFGSR EYHCCNPDCT
HIKYIHQTCK SRACSSCGMK ATERWIQKQQ HVFPECEYQH ITFTLPNTLW PIFRHNRWLL
NKLFKCAANI LLGWAKDKGI DVGIFCALHT YGRKLNWNTH LHLSVTRGGI CERTGLWKPI
YFQMKTTEPC WRAAIVSLLG KAYYELDLSS EECPYIRNKT DWSRFLSSQY NRRWKLHFAK
KTNNVKPTMN YLGRYLKRPP ISASRLSHYA KGGMITFNYL DHRTGTTDSL TLSPEEMIRR
IVEHYPDKHF KMIRYYGFLS MRRRGEALPR VYAALGMTIE AEPKMPGYAA MLKGYVKVDP
YECILCESRL VFTNFRVGNS VNDLVTHAIV QSELRAA
|
|---|
| |