| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0997 |
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| Symbol | ubiF |
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| ID | 6986769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1101750 |
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| End bp | 1102907 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643379385 |
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| Product | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase |
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| Protein accession | YP_002262488 |
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| Protein GI | 209694560 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGAAAG AATATGATTT CGCTATTGTT GGTGGTGGGA TGGTTGGTGC CGCTGCCGCT
ATAGGTTTAG CTAAATTAGG TTATTTAGTC GCTATTATTG AGCATAAAGA GCCAAGTACT
TATGACAATA AACAGCCGAT GGATATTCGA GTCTCTGCAA TCTCTCAATC ATCCGTTGAT
CTGCTTGAAA AACTAGGTGC ATGGGAAAGT ATTAAAGAAA TGCGAGTTTG TCCTTATAAG
CGCTTAGAAA CATGGGAACA CCCTGAGTGT CGAACTCGCT TTCATTCTGA TGCACTTAAT
ATGGACCAGC TTGGCTTCAT TGTTGAAAAT CGTCTTATTC AATTAGGGTT ATGGCAGACA
TTCTCTTGTT ATGACAACCT CAACGTTATT ACGCCTACAA AAATAACCGA TCTTGAGTTT
TTTAGTGATC ATAATGAACT GACGTTAGAA AATGGAGATA AAATTAAAGC GAAATGGGTT
CTTGGTGCTG ATGGCGCTAA TTCTTATGTT AGACAAAAAA CTAACATAGG GATTACGGCT
TGGGACTATC GTCAACATTG CATGTTAATT AATATAGAAA CAGAGCAACC ACAACAAGAT
ATTACGTGGC AATGGTTTAC ACCGTCAGGT CCTCGCTCAT TTCTACCTTT ACAGGGTAAT
AAAGGATCTT TGGTATGGTA TGACTCACCA AAACGCATTA AACAGCTTTG CGCGATGAAC
TCGACTCAAT TAGAAAGTGA AATAAAAGCA TACTTTCCGA AAGAACTCGG AGAATTTACG
GTAGAGCAAT ATGGTTCTTT CCCTTTAACT CGTCGACATG CTCAAAAATA CGTTGATCAT
CATTGTGTAT TGCTTGGTGA TGCCGCTCAT ACAATAAATC CTCTAGCAGG ACAGGGCGTT
AATCTTGGAT TTAAAGACAT CAAAGTGCTA TTAGAAGAAG TAGAGAAAAA AGGACTGAAT
ACAGATAGAG CTTTTAAAAT GTATGAATCA AGACGAAAGA TAGATAACTT AGCGATGCAA
AGCAGTATGG ATTTATTTTA CACTTTATTT AGTAACTCTT TACCGCCGGT TAAGTTATTA
CGAAATATAG GGTTAAAATT AGCGGACTCG TCTGGGAAGT TAAAAACACA AGCGCTGAAG
TATGCGTTAG GTTTATAG
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| Protein sequence | MMKEYDFAIV GGGMVGAAAA IGLAKLGYLV AIIEHKEPST YDNKQPMDIR VSAISQSSVD
LLEKLGAWES IKEMRVCPYK RLETWEHPEC RTRFHSDALN MDQLGFIVEN RLIQLGLWQT
FSCYDNLNVI TPTKITDLEF FSDHNELTLE NGDKIKAKWV LGADGANSYV RQKTNIGITA
WDYRQHCMLI NIETEQPQQD ITWQWFTPSG PRSFLPLQGN KGSLVWYDSP KRIKQLCAMN
STQLESEIKA YFPKELGEFT VEQYGSFPLT RRHAQKYVDH HCVLLGDAAH TINPLAGQGV
NLGFKDIKVL LEEVEKKGLN TDRAFKMYES RRKIDNLAMQ SSMDLFYTLF SNSLPPVKLL
RNIGLKLADS SGKLKTQALK YALGL
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