| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0993 |
|---|
| Symbol | |
|---|
| ID | 6988754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 1097468 |
|---|
| End bp | 1098343 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643379381 |
|---|
| Product | hemolysin |
|---|
| Protein accession | YP_002262484 |
|---|
| Protein GI | 209694556 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4535] Putative Mg2+ and Co2+ transporter CorC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0803506 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACG AAAATTCACA AAATACAGAA GGTCCGAGTA GAAAGTCCTT CTTAGGACGC
CTTTCACAAC TGTTCCAAGG GGAACCTAAA GATCGCCAAG AGTTGGTGGA TGTATTTAGA
GACTCTGAGG AAAATGAAGT TATTGACCAC GACACCCGAG ACATGCTCGA AGGCGTCATG
GAAATTTCTG AAATGAGAGT TCGAGACATT ATGTTACCGC GCTCCCAGAT GGTCACTGTA
GAGAAAACGC AAAACCTCGA ATCACTGATA GCAACAATCA TAGAAGCGTC ACACTCACGC
TACCCTGTGA TCAGTGAAGA CAAAGACCAT GTTGAAGGAA TACTCCTTGC GAAGGACTTA
TTAAGATACT TAGGTTCAGA TTGTGAAGCC TTTGAGATTG AACAAGTTAT TCGACCTGCT
GTTGTAGTAC CAGAAAGCAA ACGTGTTGAT AAGCTTTTAA AAGAGTTTAG AGAAGAACGT
TACCACATGG CCATCGTTGT CGATGAGTTT GGTGGGGTTT CTGGTTTAGT TACTATCGAA
GATATCCTTG AAGAAATTGT TGGGGATATT GAAGATGAAT TTGATGATGA AGAAGAGAAA
GACATCCGTC AGTTAAGCAA ACACACATTT GCTGTGAAAG CATTAACTGA AATCGATGAC
TTTAACGACG CTTTCTTAAC AAATTTTAGT GACGAAGAGA TTGATACCGT TGGCGGCTTA
GTATTAACGA CCTTTGGGCA TTTGCCTGAA AGTGGTGAAA CTATCGAAAT ATCTGGTTTT
ACGTTTAAAG TCACCGCTGC CGATAACCGT CGCATCATCC AACTTCAAGT GACGATTCCT
GAAAAAGAAT CAGACAAAAA ACACGAAGAA GAGTAA
|
|---|
| Protein sequence | MNDENSQNTE GPSRKSFLGR LSQLFQGEPK DRQELVDVFR DSEENEVIDH DTRDMLEGVM
EISEMRVRDI MLPRSQMVTV EKTQNLESLI ATIIEASHSR YPVISEDKDH VEGILLAKDL
LRYLGSDCEA FEIEQVIRPA VVVPESKRVD KLLKEFREER YHMAIVVDEF GGVSGLVTIE
DILEEIVGDI EDEFDDEEEK DIRQLSKHTF AVKALTEIDD FNDAFLTNFS DEEIDTVGGL
VLTTFGHLPE SGETIEISGF TFKVTAADNR RIIQLQVTIP EKESDKKHEE E
|
|---|
| |