| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0988 |
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| Symbol | holA |
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| ID | 6986763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1090734 |
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| End bp | 1091771 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643379376 |
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| Product | DNA polymerase III subunit delta |
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| Protein accession | YP_002262479 |
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| Protein GI | 209694551 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAGTAT TCCCTGAACA GCTAGTACAA AACTTAGAAC GTGGTTTACG TCAAAATTAC
CTATTATTTG GTAATGAGCC ACTTCTAAAA CAAGAATGCC TCGATCAAAT CCGTAAGCAC
AGTTTTCAAC AGGGTTTTGA AGAAAAGCAT CAATTTACGT TAGACAAACA ATTGGACTGG
AACCTGATCT TCGATTGCAC TCAAGCATTA AGTCTATTTT CATCAAGACA AATTATCGAA
TTAACCGTTT CAGATACAGG TTTAACTGCG GCTCACACCA GTAAAATAAA AGAACTCGTC
CCTATGTTAC ACGACGATAT TTTGTTGATA TTTCAAGGCC CAAGAGTCAA TAAAAGCCAA
GAAAGTACCC AATGGTTTAA AGCATTAACA CAACAAGGGT TATTTATTCC TTGTAACACC
CCTGATAACC AACAATTACC TCGTTTTATT CAACAACGTT GTAAATTATT AAAATTAAAA
CCTGACGCAG AAGCAGTACA AATGCTAGCG CAATGGCATG AAGGTAACCT ACTTGCACTT
GCTCAAAGTT TAGACAAACT GTCTTTATTA TACCCCGATG GGTTACTGAC TCTTATTAGA
ATAGAAGAAG CGTTAAACCG TAATAATCAC TTCACTCCTT TCCAGTTAAT GGATGCTTTA
TTATTTGGTC AAGCAAAGCG TGCACAACGA ATCCTTCGTC AATTAGAAGG TGAAAGTGTT
GAAGTTGTGA TTCTCTTACG TACGATCCAA AAAGAAGTGT TCTTATTGCT CTCATTTCAA
CAAGCAATCA GCCAAGGTGA AGCAATGTTT ACTGTTTTTG ATCGTTATAA GGTATGGCAA
AACCGTCGTT CATTGTATCA AGCAGCATTG CAACGCTTAT CAATGACACA AATTCAAGCA
TTAATAAAAT CATTAGCTCA GCTTGAAGTT GCCGTTAAAA CCGATTTTGA TACCAACTGT
TGGCCACAAC TTAGCCAGTT AAGCTTAGAT ATCTGTAATA TTCACATTTC AGTGACACCT
CCACCATCTC ATTCATAG
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| Protein sequence | MRVFPEQLVQ NLERGLRQNY LLFGNEPLLK QECLDQIRKH SFQQGFEEKH QFTLDKQLDW
NLIFDCTQAL SLFSSRQIIE LTVSDTGLTA AHTSKIKELV PMLHDDILLI FQGPRVNKSQ
ESTQWFKALT QQGLFIPCNT PDNQQLPRFI QQRCKLLKLK PDAEAVQMLA QWHEGNLLAL
AQSLDKLSLL YPDGLLTLIR IEEALNRNNH FTPFQLMDAL LFGQAKRAQR ILRQLEGESV
EVVILLRTIQ KEVFLLLSFQ QAISQGEAMF TVFDRYKVWQ NRRSLYQAAL QRLSMTQIQA
LIKSLAQLEV AVKTDFDTNC WPQLSQLSLD ICNIHISVTP PPSHS
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