Gene VSAL_I0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0987 
Symbol 
ID6986762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1090368 
End bp1090685 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content40% 
IMG OID643379375 
Producthypothetical protein 
Protein accessionYP_002262478 
Protein GI209694550 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAAGATA AAGAACTGCA CGACTTTCTA TTCAATCATG TTGATGACAT GAAAGCTGAA 
AATATTACAA CAGTTGATGT ACGTGATAAA TCAAGCATTA CAGACTTTAT GATTGTATGT
ACGGGTACAT CAAAACGCCA CGTCAGCTCA ATTGCTTCAA ATGTATCGGA CAAAGCAAGA
GAAGCTGGGC TGATCCCTTA TGGTGTTGAT GGAGAAGCCG AAGGTGAATG GGTTGTTGTC
GATATGGGTG ATGTAATGAT CCATATTTTA CAAGCTGAGC ACCGTGAGCT ATACCAACTT
GAAAAACTGT GGAGCTAA
 
Protein sequence
MQDKELHDFL FNHVDDMKAE NITTVDVRDK SSITDFMIVC TGTSKRHVSS IASNVSDKAR 
EAGLIPYGVD GEAEGEWVVV DMGDVMIHIL QAEHRELYQL EKLWS