Gene VSAL_I0985 details

Gene Information

• Locus tag: VSAL_I0985
• Symbol: mrdA
• ID: 6988831
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 1088013
• End bp: 1089890
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643379373
• Product: penicillin-binding protein 2
• Protein accession: YP_002262476
• Protein GI: 209694548
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0768] Cell division protein FtsI/penicillin-binding protein 2
• TIGRFAM ID: [TIGR03423] penicillin-binding protein 2

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTTTAAGC GCAGACGCAC ACAGATACGT GACTATCATG CAGAATCGAG ATTATTTGTT 
TCTAGAGCAA TAGTCTCTTT TGTCGGGATA TTGGTTCTCA TTAGCCTCTT ATTGACTAAT 
TTATACAATA TCCAAATCAA TGAATTTCAA GATTATAAAA CACGTTCAAA CGATAACCGC 
ATAAAAATCG TACCTATAGC CCCAAATCGA GGCCTTATTT ATGATCGTAA TCGTATGCCA 
CTCGCGGAAA ATCGTCCTGT TTTTAATTTA GAAATCACAC CAGATAAAGT GAAAGATCTG 
TCTGCGCTAT TTACTGAAAT ACAGACTATC TTGCCTATTT CGCAAGATAA TATTGATGAC 
TTCACAAAAG AGCGTCGTCG TACTCGTCGT TTTAAATCCA TACCAATTCT GTCTCAATTA 
ACCCAAGAAC AAGTGGCCAT TTTCTCAGTA AACCAACACA AATTTTCTGG TGTAGAAATA 
AAGGCTTATC TAAAACGCTT CTATCCTTAT GGAAAAACGT TTACGCATGT ACTGGGCTAT 
GTTGCAAAAA TTAATGATAG AGATTTAGCT CGATTAGCTA GAGAAGAAAA AGATGCCAAT 
TATCAAGCTA CCCGAGATAT AGGTAAGCTA GGTATCGAAC GCTACTACGA AGATACCCTT 
CATGGTACGG CGGGTTATCA AGAAGTCGAG GTTAACAGTC GCGGTCGCGT AGTACGTACA 
TTAAAATACG TCCCACCAAT CCCAGGCAAA GACATTGTTT TAAATCTTGA TATCGAAATT 
CAAAAATTTG TGGCTAAACA ATTAGACGGC CGTCGTGGTG CTGCAATTGT ATTAGAACCG 
AACACAAGTG CCGTATTAGC GATGGTATCA AGCCCTAGCT ATGATCCAAA TTTATTTGTA 
CATGGCATTT CCAGTAAAAA CTATAACGCA TTATTGAATA ATCCAGATCG CCCATTAGTT 
AACCGAGCGA CGCTGGGTAT CTATCCACCA GCGTCAACGG TAAAACCTTT TATTGCCGTC 
TCTGCATTAG AAGAGAAGAT AGTTACTCCG CTCACCACCC GCAATGATCC GGGCTACTGG 
CGTATTCCTA ACTCAAAAAC CAGACCATTC CGAGATTGGA AACGTTGGGG TCATGGAACC 
GTGAATTTAA AACAAGCGAT AGAAGAATCT GTTGATACTT TCTTCTACCA AATATCTTTT 
GATATGGGAA TTGACCGCTT ATCAGCATGG ATGATGAAAT TTGGTTTTGG TGATTATACC 
GGCATCGATA TCCATGAAGA AAGCAAAGCA AATATGCCAA CTCGAGATTG GAAAGTCGCT 
CGTTTCCGTA CACCTTGGTA TCAAGGCGAT ACGATTCCAG TCGGTATTGG ACAAGGTTAT 
TGGACTGCAA CACCGATGCA AATAGCTAAG GCGACTTCTG TGCTCGTGAA TCGCGGTAAA 
GTTCAAGCGC CTCACTTATT GAAAACAATT ATTGATGGTA ACGTTGAAAC CCCGTTTGAA 
CCAGAACCGT ACCCTCCAAT AGAAGGGATT AGAGACAGTT ATTGGCAGCT CGCCATTGAT 
GGCATGATCT TAGTGAATAA TGGTGCTAAA GGTACAGCCA GACGTGTGTT TGCTGGCACT 
CCTTATGTTA GTGCAGGTAA ATCAGGCTCA TCTCAAGTCT TTGGTTTAAA TGGCCAAGAA 
TACAACGCTG ATGAGATTGC AGAACGTTTA CGTGACCATG CTTTGTTTAC TGGCTTTGCT 
CCAGCAAAAG ATCCAAAAGT CATTATCTCG CTCGTTCTTG AAAATGGCGG CGGCGGTTCT 
AGCCAAGGCG GCCCAATTGC ACGAAGTGTA TTTGACCATG TGTTATTACC AGCAACAGGA 
GAGGTGAGTA ATAAATAA 

 

Protein sequence

MFKRRRTQIR DYHAESRLFV SRAIVSFVGI LVLISLLLTN LYNIQINEFQ DYKTRSNDNR 
IKIVPIAPNR GLIYDRNRMP LAENRPVFNL EITPDKVKDL SALFTEIQTI LPISQDNIDD 
FTKERRRTRR FKSIPILSQL TQEQVAIFSV NQHKFSGVEI KAYLKRFYPY GKTFTHVLGY 
VAKINDRDLA RLAREEKDAN YQATRDIGKL GIERYYEDTL HGTAGYQEVE VNSRGRVVRT 
LKYVPPIPGK DIVLNLDIEI QKFVAKQLDG RRGAAIVLEP NTSAVLAMVS SPSYDPNLFV 
HGISSKNYNA LLNNPDRPLV NRATLGIYPP ASTVKPFIAV SALEEKIVTP LTTRNDPGYW 
RIPNSKTRPF RDWKRWGHGT VNLKQAIEES VDTFFYQISF DMGIDRLSAW MMKFGFGDYT 
GIDIHEESKA NMPTRDWKVA RFRTPWYQGD TIPVGIGQGY WTATPMQIAK ATSVLVNRGK 
VQAPHLLKTI IDGNVETPFE PEPYPPIEGI RDSYWQLAID GMILVNNGAK GTARRVFAGT 
PYVSAGKSGS SQVFGLNGQE YNADEIAERL RDHALFTGFA PAKDPKVIIS LVLENGGGGS 
SQGGPIARSV FDHVLLPATG EVSNK