| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0984 |
|---|
| Symbol | mrdB |
|---|
| ID | 6986761 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 1086892 |
|---|
| End bp | 1088013 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643379372 |
|---|
| Product | rod shape-determining protein RodA |
|---|
| Protein accession | YP_002262475 |
|---|
| Protein GI | 209694547 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0772] Bacterial cell division membrane protein |
|---|
| TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.709964 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGTTG ATATCGCATC AGGAAAAAAT CGTGACTTTT TCCATCGAAT TCATATAGAT
TTGCCCTTAC TGCTTGGCAT CTTATTATTA ATGGCTTGTG CTCTTGTCAT TATGTACAGT
GCCAGCGGGC AAAGCTTATT GATGATGGAT AAGCAAGCAA TGCGAATGTT ACTCTCCTTA
GGCGTTATGG CTTTACTTGC CCAAATACCA CCAAGAACTT ATGAGGTCGC TGCACCTTAT
CTCTTTGCTA TTGGTGTTAT CTTATTATTA GGGGTTTTAT TCTTTGGTGA ATCCTCTAAA
GGCGCTCAAC GTTGGTTAAA CTTAGGATTT GTTCGTTTTC AACCTTCGGA ATTAATTAAG
CTCGCCGTTC CCTTAATGAT TGCCAGATAT ATAGGTAATA AACCTCTTCC TCCAACGGTT
CGTACCTTGT TTATCGCGTT ATTGATGGTA TTTGTTCCTA CCATTATGAT CGCCAAACAG
CCCGATTTAG GTACTTCTAT CTTAATCGCA GCTTCAGGTG TTTTTGTTAT CTTTCTAGCG
GGCATTAGTT GGAAAATAAT TACTGCCGCC GCCATTGCGG TTGGGGGGTT TATTCCTATC
CTATGGTTCT TTTTGATGCG GCCTTACCAA AAAGTAAGGG TTGAGACATT ATTTAACCCA
GAATCTGATC CTTTAGGCGC TGGCTATCAC ATTATCCAAT CTAAAATTGC TATCGGTTCA
GGAGGGTTAT TCGGCAAAGG GTGGTTGCAT GGTACCCAGT CTCAACTCGA ATTTATTCCT
GAGCGCCATA CTGATTTCAT TTTTGCCGTT ATCGCAGAAG AATGGGGACT CATTGGAGTC
ATGGTATTGC TCACGATCTA TTTATTCATT ATTGGCCGAG GATTATTCTT AGCAAGCCAA
GCCCAAACTG CTTTTGGACG AATGATGGGG GGCAGTGTCG TTTTAAGCTT TTTTGTTTAT
ATTTTTGTAA ACATAGGCAT GGTTAGTGGT ATTTTGCCCG TCGTTGGCGT TCCTCTTCCC
CTCGTTAGTT ATGGCGGTAC ATCAATGGTA ACGTTGATGG CAGGATTTGG CATTTTAATG
TCAATACACA CACATAAAAA AATACACTCC AAGGCAAACT AA
|
|---|
| Protein sequence | MRVDIASGKN RDFFHRIHID LPLLLGILLL MACALVIMYS ASGQSLLMMD KQAMRMLLSL
GVMALLAQIP PRTYEVAAPY LFAIGVILLL GVLFFGESSK GAQRWLNLGF VRFQPSELIK
LAVPLMIARY IGNKPLPPTV RTLFIALLMV FVPTIMIAKQ PDLGTSILIA ASGVFVIFLA
GISWKIITAA AIAVGGFIPI LWFFLMRPYQ KVRVETLFNP ESDPLGAGYH IIQSKIAIGS
GGLFGKGWLH GTQSQLEFIP ERHTDFIFAV IAEEWGLIGV MVLLTIYLFI IGRGLFLASQ
AQTAFGRMMG GSVVLSFFVY IFVNIGMVSG ILPVVGVPLP LVSYGGTSMV TLMAGFGILM
SIHTHKKIHS KAN
|
|---|
| |