Gene VSAL_I0980 details

Gene Information

• Locus tag: VSAL_I0980
• Symbol: lipB
• ID: 6988751
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: -
• Start bp: 1083372
• End bp: 1084058
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 643379368
• Product: lipoate-protein ligase B
• Protein accession: YP_002262471
• Protein GI: 209694543
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0321] Lipoate-protein ligase B
• TIGRFAM ID: [TIGR00214] lipoate-protein ligase B

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.33716
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCCTAT TGAACAAGCG TCTAGTAGTT AAAAACCTTG GCCGACAAGA TTATGAGCCG 
GTATGGAAAG CGATGCATAC CTTTACTGAC GAACGCGATG AAAACTCGTG TGATGAAGTA 
TGGTTAGTTG AGCACAATCC AGTATTCACT CAAGGACAAG CAGGTAAAGA AGAACATGTT 
CTGGCTGCTG GAGATATCCC TGTCGTAAAA AGTGACCGTG GCGGGCAAGT AACCTACCAT 
GGACCAGGTC AACTCGTCGC TTATGTTTTG ATTAACTTAC GCAGAAAGAA AATAGGTGTC 
CGTGAATTAG TCACACACAT TGAAAACACG GTAATCAACA CATTAAGTCA GTTTACTATT 
GAATCAGCAG CAAGACCTGA TGCTCCGGGT GTGTATGTTG ATAATAAAAA AATATGTTCT 
CTTGGTTTGC GTATCCGCAA AGGATGTTCA TTCCACGGAC TGGCACTAAA CGTAAACATG 
GATTTATCTC CTTTCCTAAG AATTAACCCT TGTGGTTATG CTGGAATGGA AATGATACAA 
CTGCACGATT TAATTAAAGA AAATGATACG GTAGAGAACA AAGCAGAACA CGTTGAAGAT 
GTTCACCCTT TACTTATTAA AGAATTAACA ACATTACTTG ATTACACTGA TATTGAGTAC 
ATAACGGAAA GCAGCCATCA TGAGTAA 

 

Protein sequence

MILLNKRLVV KNLGRQDYEP VWKAMHTFTD ERDENSCDEV WLVEHNPVFT QGQAGKEEHV 
LAAGDIPVVK SDRGGQVTYH GPGQLVAYVL INLRRKKIGV RELVTHIENT VINTLSQFTI 
ESAARPDAPG VYVDNKKICS LGLRIRKGCS FHGLALNVNM DLSPFLRINP CGYAGMEMIQ 
LHDLIKENDT VENKAEHVED VHPLLIKELT TLLDYTDIEY ITESSHHE