Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0979 |
Symbol | lipA |
ID | 6989011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1082414 |
End bp | 1083379 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643379367 |
Product | lipoyl synthase |
Protein accession | YP_002262470 |
Protein GI | 209694542 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0320] Lipoate synthase |
TIGRFAM ID | [TIGR00510] lipoate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.464322 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAAGC CAATTCAAAT GGAAAAAGGC GTTAAATACC GCGATGCCGA TAAAATGGCA TTAATTCCAG TTAAAAACAT GCCAACAGAG AAAAAAGAAG TATTACGTAA GCCTGAGTGG ATGAAGATCA AACTTCCATC AAGCAGTAAG CGTATTGATG AAATTAAATC AGCAATGCGT AAAAATAATC TTCACTCTGT ATGTGAAGAA GCATCTTGCC CTAACTTAGC AGAATGCTTT AACCATGGTA CGGCAACCTT CATGATCTTA GGTGCAATTT GTACCCGTCG CTGCCCTTTC TGTGATGTTG CTCATGGACG CCCAGTCACT CCTGAAGCTG AAGAGCCGAA GAAACTGGCA AAAACGATTA AAGACATGAA ACTGAAATAT GTGGTAATCA CATCAGTCGA CCGTGATGAT TTACGTGATG GCGGAGCACA ACATTTTGCG GATTGTAATC GTGAAATTCG TGAATTAAAC CCTGAGATCC GTATTGAAAC GCTAGTTCCT GATTTTCGTG GTCGTATGGA TCGCGCATTA GATGCGATGC ATAGCAACCC ACCAGATGTA TTCAACCACA ATTTAGAGAC CGCTCCACGC CTATACCGTA AGGTTCGCCC TGGCGCAAAT TACCAGTGGT CACTTGACCT ATTGAAGAAA TTCAAAGAAC AACACCCAAC AGTACCAACC AAATCTGGTG TGATGATGGG TCTAGGCGAA ACAAAAGAAG AAATAGTCGA AGTACTAAAA GACTTACGTG CTCACGGTGT AACGATGTTA ACACTGGGTC AGTATTTAGC ACCAAGTCGC CATCACCTAC CCGTTGAGCG TTACGTTCCA CCTGCAGAGT TTGATGAATT AAAAGTGATT GCTCTTGAAC TTGGATTTAC CCATGCGGCT TGTGGTCCAT TTGTTCGCTC TTCTTACCAT GCTGATCTTC AAGCGAAAGG CGAAGAAGTT AAATAG
|
Protein sequence | MSKPIQMEKG VKYRDADKMA LIPVKNMPTE KKEVLRKPEW MKIKLPSSSK RIDEIKSAMR KNNLHSVCEE ASCPNLAECF NHGTATFMIL GAICTRRCPF CDVAHGRPVT PEAEEPKKLA KTIKDMKLKY VVITSVDRDD LRDGGAQHFA DCNREIRELN PEIRIETLVP DFRGRMDRAL DAMHSNPPDV FNHNLETAPR LYRKVRPGAN YQWSLDLLKK FKEQHPTVPT KSGVMMGLGE TKEEIVEVLK DLRAHGVTML TLGQYLAPSR HHLPVERYVP PAEFDELKVI ALELGFTHAA CGPFVRSSYH ADLQAKGEEV K
|
| |