Gene VSAL_I0979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0979 
SymbollipA 
ID6989011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1082414 
End bp1083379 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content43% 
IMG OID643379367 
Productlipoyl synthase 
Protein accessionYP_002262470 
Protein GI209694542 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0320] Lipoate synthase 
TIGRFAM ID[TIGR00510] lipoate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.464322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGC CAATTCAAAT GGAAAAAGGC GTTAAATACC GCGATGCCGA TAAAATGGCA 
TTAATTCCAG TTAAAAACAT GCCAACAGAG AAAAAAGAAG TATTACGTAA GCCTGAGTGG
ATGAAGATCA AACTTCCATC AAGCAGTAAG CGTATTGATG AAATTAAATC AGCAATGCGT
AAAAATAATC TTCACTCTGT ATGTGAAGAA GCATCTTGCC CTAACTTAGC AGAATGCTTT
AACCATGGTA CGGCAACCTT CATGATCTTA GGTGCAATTT GTACCCGTCG CTGCCCTTTC
TGTGATGTTG CTCATGGACG CCCAGTCACT CCTGAAGCTG AAGAGCCGAA GAAACTGGCA
AAAACGATTA AAGACATGAA ACTGAAATAT GTGGTAATCA CATCAGTCGA CCGTGATGAT
TTACGTGATG GCGGAGCACA ACATTTTGCG GATTGTAATC GTGAAATTCG TGAATTAAAC
CCTGAGATCC GTATTGAAAC GCTAGTTCCT GATTTTCGTG GTCGTATGGA TCGCGCATTA
GATGCGATGC ATAGCAACCC ACCAGATGTA TTCAACCACA ATTTAGAGAC CGCTCCACGC
CTATACCGTA AGGTTCGCCC TGGCGCAAAT TACCAGTGGT CACTTGACCT ATTGAAGAAA
TTCAAAGAAC AACACCCAAC AGTACCAACC AAATCTGGTG TGATGATGGG TCTAGGCGAA
ACAAAAGAAG AAATAGTCGA AGTACTAAAA GACTTACGTG CTCACGGTGT AACGATGTTA
ACACTGGGTC AGTATTTAGC ACCAAGTCGC CATCACCTAC CCGTTGAGCG TTACGTTCCA
CCTGCAGAGT TTGATGAATT AAAAGTGATT GCTCTTGAAC TTGGATTTAC CCATGCGGCT
TGTGGTCCAT TTGTTCGCTC TTCTTACCAT GCTGATCTTC AAGCGAAAGG CGAAGAAGTT
AAATAG
 
Protein sequence
MSKPIQMEKG VKYRDADKMA LIPVKNMPTE KKEVLRKPEW MKIKLPSSSK RIDEIKSAMR 
KNNLHSVCEE ASCPNLAECF NHGTATFMIL GAICTRRCPF CDVAHGRPVT PEAEEPKKLA
KTIKDMKLKY VVITSVDRDD LRDGGAQHFA DCNREIRELN PEIRIETLVP DFRGRMDRAL
DAMHSNPPDV FNHNLETAPR LYRKVRPGAN YQWSLDLLKK FKEQHPTVPT KSGVMMGLGE
TKEEIVEVLK DLRAHGVTML TLGQYLAPSR HHLPVERYVP PAEFDELKVI ALELGFTHAA
CGPFVRSSYH ADLQAKGEEV K