Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0949 |
Symbol | nqrA |
ID | 6988293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 1046336 |
End bp | 1047676 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643379341 |
Product | Na(+)-translocating NADH-quinone reductase subunit A |
Protein accession | YP_002262444 |
Protein GI | 209694516 |
COG category | [C] Energy production and conversion |
COG ID | [COG1726] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA |
TIGRFAM ID | [TIGR01936] NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTACAA TAAAAAAGGG TTTGGATCTT CCTATAGCAG GAGTTCCAAC TCAGGTGATT AATGATGGTA ATTCCATCAC TAAAGTCGCC TTGCTTGGCG AAGAGTATGT TGGTATGCGT CCTACGATGC ATGCTCGCGT TGAAGATGTA GTTAAAAAAG GTCAGATTCT TTTTGCTGAT AAAAAGAATC CTGGTGTTAT TTTTACATCT CCAGTAAGTG GTAAAGTTGT TGAAATTAAC CGTGGTGCTA AACGTGTACT TCAATCTGTA GTAATTGCAG TTGAAGGCGA AGAGCAGGTT ACTTTTAATA GCTATGCAGC AAATCAGTTG GCTTCTCTTG ATCGTGATGC GATCAAGCAA CAGCTTATTG ATTCTGGTGC ATGGACTGCA TTACGTACTC GTCCGTTCAG CAAGGTTCCA GCGATCGATT CTGAAACAAA GGCTATCTTT GTAACTGCTA TGGATACTAA TCCTTTAGCA GCTGATGCAG AAGTGATCAT CAACCAACAA GAAGACGCTT TTGTTGCAGG CCTAGATTTA TTATCTGTGT TAACAGGTGA GAAGGTTTAT GTATGTAAGA AAGGTGGGAG TTTACCTCGC TCTTCTCAAG GCAATGTTGA AGAACATGTA TTTGATGGCC CTCATCCAGC AGGGTTAGCG GGTACTCACA TGCATTATTT GTATCCTGTG GATCTAAATA ATGTGGCGTG GAGCATTGGC TACCAAGACG TTATTGCTTT TGGTCAATTA TTCTTAACGG GTGAAATCTA CTCTGACAGA ATCGTATCTT TAGCTGGACC TGCCGTAAAT AATCCTCGTT TAGTTCGTAC TATTACTGGT GCTAGCTTAC TTGAATTAAC TGACAGCGAA GTAATGCCTG GTGAAGTACG AATCATTTCT GGTTCTGTAT TAAATGGTAC TCAAGCGTCT GGCCCTCATG CCTACCTTGG TCCTTACCAT CAGCAAGTAT GTGTTCTTCG TGAAGGTCGT GAGAAAGAGT TTTTAGGCTG GGCTGTCCCT GGTAAAAACA AATTCTCTGT TACTCGTTCA TTCCTAAGCC ATGTATTCTC AGGTCAATTG TTTAACATGA CAACAACTAC CAATGGTAGT GATCGTGCAA TGGTGCCAAT TGGTAGTTAC GAACGTGTAA TGCCTTTAGA CATGGAACCT ACCATGTTAT TGCGTGACCT TTGTGCTGGT GATGTTGACA GTGCTGCACG TTTAGGTGCA TTAGAATTAG ATGAAGATGA TCTAGGTCTA TGTACGTATG TGTGCCCTGG TAAATATGAG TATGGTCCAA TGCTTCGTGA GATTTTGGAT ACCATCGAGA AGGAAGGGTA A
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Protein sequence | MITIKKGLDL PIAGVPTQVI NDGNSITKVA LLGEEYVGMR PTMHARVEDV VKKGQILFAD KKNPGVIFTS PVSGKVVEIN RGAKRVLQSV VIAVEGEEQV TFNSYAANQL ASLDRDAIKQ QLIDSGAWTA LRTRPFSKVP AIDSETKAIF VTAMDTNPLA ADAEVIINQQ EDAFVAGLDL LSVLTGEKVY VCKKGGSLPR SSQGNVEEHV FDGPHPAGLA GTHMHYLYPV DLNNVAWSIG YQDVIAFGQL FLTGEIYSDR IVSLAGPAVN NPRLVRTITG ASLLELTDSE VMPGEVRIIS GSVLNGTQAS GPHAYLGPYH QQVCVLREGR EKEFLGWAVP GKNKFSVTRS FLSHVFSGQL FNMTTTTNGS DRAMVPIGSY ERVMPLDMEP TMLLRDLCAG DVDSAARLGA LELDEDDLGL CTYVCPGKYE YGPMLREILD TIEKEG
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