| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0945 |
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| Symbol | rotA |
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| ID | 6986739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1043240 |
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| End bp | 1043797 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643379337 |
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| Product | peptidyl-prolyl cis-trans isomerase precursor |
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| Protein accession | YP_002262440 |
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| Protein GI | 209694512 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACTAA CATCAAAAGT GGCTCTTTTA ATTGCCGCAC TTGGCTTCAA TCAATCAGCA
TTGGCTGAAT CCGTAAAATT TGATACCACA TTAGGGAGCT TTACTATTGA GCTCAATGCA
GAGAAAGCGC CAATTTCTGT CGCTAACTTT ATTCGCTATG TCGAAGATGG AAGCTACGTA
GGAACGCAAT TCCATCGAGT GATCCCTGGC TTTATGGCTC AAGGCGGCGG TTTTGATAAA
GACATGCTGA AAAAATCGAA TTATGGCCCA ATTAAAAACG AAGGTTATAA CGGTTTAGGT
AATGATACCG CTACGGTTGC AATGGCTCGT ACCAATAACC CGGATTCAGC AACTCGTCAG
TTTTACATTA ACTTAAATGA CAATGATTTC TTAAACGCAA ATCAACGTCC ACCAGGTTAT
GCTGTTTTTG GTAAAGTAAC CCAAGGTTTT GACATTATTC AAAAAATGGC CTCAAAACCA
ACCAAAGCCC TTGCCAATGG GATGCGTGAT ATTCCCGTTG AGCCAATTAT CATAACTAAA
GCAACATTGA TTAAATAA
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| Protein sequence | MKLTSKVALL IAALGFNQSA LAESVKFDTT LGSFTIELNA EKAPISVANF IRYVEDGSYV
GTQFHRVIPG FMAQGGGFDK DMLKKSNYGP IKNEGYNGLG NDTATVAMAR TNNPDSATRQ
FYINLNDNDF LNANQRPPGY AVFGKVTQGF DIIQKMASKP TKALANGMRD IPVEPIIITK
ATLIK
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