Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0941 |
Symbol | thiJ |
ID | 6986738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1039081 |
End bp | 1039671 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643379334 |
Product | protein ThiJ |
Protein accession | YP_002262437 |
Protein GI | 209694509 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | [TIGR01383] DJ-1 family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.963617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACCA ATATTCTAGT CTGTCTTGCT CCCGGAACGG AAGAACTTGA AGCAATTACC GTTATTGATA TTTTAGAGCG CGCTAAATTT AAGGTCACCA TTGCTAGTAC GGCCTTTGAT GGTTCATTAA CAATGAAAGC AGCTCAACGA GTAACACTAA CGGCAGACGT AAAATTAGTC GATGTGGCTG ATGAAGAATT TGACTGTATT GTCCTTCCTG GTGGATTAAA AGGCTCTGAA AACTTCCGCG ACAGTACATT ATTAATTGAG CTACTAAAAC AACAAAAAGA CGATGGTAAA TGGGTTGCAG CAATTTGCGC AGCGCCTGCC ATCGTACTCC AACATCATAA TATTTATCCT GCCGCTTTAA TGACGTGTTA CCCAGCACTA ATGCACCACA TCCCAGAACA AAATCGCCGA GTAAAACGTG TGTTTACCGA TGTACTAAAT AACCTAATTA CAAGTCAAGG CCCGGGTTCT GCACTGGAGT TTGCAATGGA AATTGTGACG CAATTTGGTG GTAAAGAACT GACCGCTCAA TTAGCGACTG ACTTAGTAAC ACTACCAACA TTAAATTACC ATCAAGCCTA A
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Protein sequence | MTTNILVCLA PGTEELEAIT VIDILERAKF KVTIASTAFD GSLTMKAAQR VTLTADVKLV DVADEEFDCI VLPGGLKGSE NFRDSTLLIE LLKQQKDDGK WVAAICAAPA IVLQHHNIYP AALMTCYPAL MHHIPEQNRR VKRVFTDVLN NLITSQGPGS ALEFAMEIVT QFGGKELTAQ LATDLVTLPT LNYHQA
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