| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0934 |
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| Symbol | ispA |
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| ID | 6988435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1032279 |
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| End bp | 1033175 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643379327 |
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| Product | geranyltranstransferase |
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| Protein accession | YP_002262430 |
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| Protein GI | 209694502 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.298715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGATT CACTAAAACA ACAACTGCCT ATTTTTCAAC AGCGTAACAT TGAACATTTA
AATCAATGGT TTGAAAAGAT TGAAATTCAA CAACAACCGC TTACTGATGC AATGAAATAC
GCATTACTAT TAGGTGGCAA ACGCGCACGT CCTTATCTCG TCTATATTAC GGCTAACATG
TTAGGCATAG ATAGTGAGCA TGCAGATGCA CCTGCGGCGG CAGTTGAATG TATTCATTCT
TACTCATTAA TTCATGATGA TTTACCAGCT ATGGATAATG ACGATTTACG TCGTGGTCAT
GCGACTTGTC ATATTAAATT CGATGAAGCA ACAGCCATTC TCGCTGGCGA TGCATTGCAA
ACCTTAGCCT TTGAAATTTT GGCTAACGGT ACCCTAGCAG AAGAAGCAGA ATCCTCGCGT
ATTGATATGA TCCGAGTATT ATCTAAAGCA TCAGGGGCAT CAGGGATGTG TATGGGTCAA
TCACTTGACC TACAAGCCGA AGGGAAGCAA GTTGATTTAC TCTCTTTAGA GCAAATCCAT
GCCAACAAAA CCGGTGCATT AATGAAAAGT GCCATTCAAC TTGGTGCGTT ATGTGCTGGT
GAAAAAGGCA AACAAATACT TCCACAACTT GAAAAATACG CAGACGCTAT TGGTCTCGCC
TTTCAAGTTC AAGATGATAT CTTAGATATC ACAAGTGACA CCGAAACATT AGGAAAACCT
CAAGGCTCTG ATATAGCCTT AGAGAAAAGT ACCTATCCTG CTTTATTAGG CCTTGATGGT
GCTAAACTGA AAGCAGAACA ATTATACCAA ACGGCTATCA CTGCATTAGA TGATATTCCA
TATAACACGG ATGCAATGCA AGCGTTCGCT CAATACGTCA TCGAGCGTAA AAACTAA
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| Protein sequence | MTDSLKQQLP IFQQRNIEHL NQWFEKIEIQ QQPLTDAMKY ALLLGGKRAR PYLVYITANM
LGIDSEHADA PAAAVECIHS YSLIHDDLPA MDNDDLRRGH ATCHIKFDEA TAILAGDALQ
TLAFEILANG TLAEEAESSR IDMIRVLSKA SGASGMCMGQ SLDLQAEGKQ VDLLSLEQIH
ANKTGALMKS AIQLGALCAG EKGKQILPQL EKYADAIGLA FQVQDDILDI TSDTETLGKP
QGSDIALEKS TYPALLGLDG AKLKAEQLYQ TAITALDDIP YNTDAMQAFA QYVIERKN
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