| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0913 |
|---|
| Symbol | |
|---|
| ID | 6989046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 1013608 |
|---|
| End bp | 1014405 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643379309 |
|---|
| Product | putative hydrolytic enzyme |
|---|
| Protein accession | YP_002262412 |
|---|
| Protein GI | 209694484 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAATT CTTTGTTATT CCATAAAACC TATGAACATG AATCAAGCTC AAAGTGGGTT
GTATTTGTTC ATGGAGCAGG TGGAAGTTCC ACTACATGGT TCAAACAAAT CGCTGCTTTT
AGAAAGAATT TTAATATTTT GCTTATTGAT TTACGTGGCC ACGGTCGCTC AAGTCACTTC
TCACAATTAA AAGAATTCAT TAATAAACAG TATTCTTTTA AGGTCGTAAG CCAAGATATT
ATCGATGTCC TTGATCACCT TAATATTAAA TCAGCACATT TTGTTGGTAT GTCTCTTGGC
ACCATCATTA TTCGTAACCT AGCGGAACTG GCACAAGACA GAGTCAGTTC GATGGTATTA
GCCGGTGCAA TTACGCGTTT TAATTTCCGC TCTCAGTTTT TGATTAAAAT GGGCGATATT
ACTAAAAATA TCATGCCTTA TATGTGGCTG TATAAATTGT TTGCTTATGT TGTCATGCCA
CAAAAAAGCC AAAAAGAATC GCGTCATATT TTCACCAGAG AAGCTAAGAA ATTATGCCAG
AAAGAGTTTA AACGTTGGTT TAAATTAGCT GCGGATGTGA ATCCATTAAT GCGCTGTTTT
AAAGATAAAG AATTACCAAT CCCCACGTTG TATGTCATGG GTGAAAATGA CTACATGTTC
ATGAAACCAG TACAAGAAAT GGTTGCGGTA CATGAACACA GTCATTTATT GCAAATTCCA
GAATGTGGTC ACGTATGTAA TATCGACAGG CCGAGAGAAT TTAATAAACA CGCGATAGAG
TTTATTACTG CACAATAA
|
|---|
| Protein sequence | MSNSLLFHKT YEHESSSKWV VFVHGAGGSS TTWFKQIAAF RKNFNILLID LRGHGRSSHF
SQLKEFINKQ YSFKVVSQDI IDVLDHLNIK SAHFVGMSLG TIIIRNLAEL AQDRVSSMVL
AGAITRFNFR SQFLIKMGDI TKNIMPYMWL YKLFAYVVMP QKSQKESRHI FTREAKKLCQ
KEFKRWFKLA ADVNPLMRCF KDKELPIPTL YVMGENDYMF MKPVQEMVAV HEHSHLLQIP
ECGHVCNIDR PREFNKHAIE FITAQ
|
|---|
| |