Gene VSAL_I0907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVSAL_I0907 
Symbol 
ID6988474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAliivibrio salmonicida LFI1238 
KingdomBacteria 
Replicon accessionNC_011312 
Strand
Start bp1007807 
End bp1008676 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content40% 
IMG OID643379303 
Productputative hydrolase 
Protein accessionYP_002262406 
Protein GI209694478 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGCAT TTCATCAATA TGACCTATCG CTTCATCACG GTTCGTTAGC GGTAATAGAG 
CTTGGACCTA ACAATGCCGA TAATGTAGTT TTATTTTTAC ATGGTTGGCA AGATAACGCG
GCTACGTTTT TAAGTACAAT GACGGCTTTT TCAGTTTCTA ACCCGACCTG TCGCTTAATT
GCATTTGATT GGTTTGGGCA CGGATTATCT GATCATAAAG GCGTCGATCA TTTTTATCAT
TTTTTTGATT ATGTTGATGA TCTTCATCAG GCGATACTGT CTTTAAAACT AGATAGCGTT
ATTTTGGTGG GGCATTCATT GGGCGGGTTG ATTGCGAGTG CTTATAGCGC GGCTTTTCCT
GAAAAAGTGG CTGCATTAAT GATGATAGAA GCATTAGGCC CTTTAAGTGA AGAGGCGGAG
AAAACATCCG AACGATTACG TGAAGGTGTA TTAAGTCGTC AGCGTTATCG TCATAAGCCA
CAAAGAACAT TAAAAGATAG GCAAGCAGCG TTAGCGTTGC GCTCTAAGGT AAACCAATTA
CCAGAAGTGT TATTAGAACC TATAATGCAA AGAGCAGTAC GTTCAACCTC TGATGGGGTG
CAGTGGACGA CGGATGCGAA AGTAAAATGC GAATCTTTGT ATCGAATGTC AGAAGCCCAC
GCATTGGCTC TACTGTCTGA TATAACATGT CCCGTGATTG TCATTATTGG GGTTGACGGG
TATGAACATT TAAAGCAAAA AGAGCATCGC TATTCTTATA TTCAACACGT TGAGTCTTTT
CAAATCGAGG GTGGGCATCA TTGTCATTTA CAACACCCGG AAAAAATATC AACGTATTTA
AATGTGTTAT TTAACAAAAT TAATACTTAA
 
Protein sequence
MHAFHQYDLS LHHGSLAVIE LGPNNADNVV LFLHGWQDNA ATFLSTMTAF SVSNPTCRLI 
AFDWFGHGLS DHKGVDHFYH FFDYVDDLHQ AILSLKLDSV ILVGHSLGGL IASAYSAAFP
EKVAALMMIE ALGPLSEEAE KTSERLREGV LSRQRYRHKP QRTLKDRQAA LALRSKVNQL
PEVLLEPIMQ RAVRSTSDGV QWTTDAKVKC ESLYRMSEAH ALALLSDITC PVIVIIGVDG
YEHLKQKEHR YSYIQHVESF QIEGGHHCHL QHPEKISTYL NVLFNKINT