Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0907 |
Symbol | |
ID | 6988474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 1007807 |
End bp | 1008676 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643379303 |
Product | putative hydrolase |
Protein accession | YP_002262406 |
Protein GI | 209694478 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGCAT TTCATCAATA TGACCTATCG CTTCATCACG GTTCGTTAGC GGTAATAGAG CTTGGACCTA ACAATGCCGA TAATGTAGTT TTATTTTTAC ATGGTTGGCA AGATAACGCG GCTACGTTTT TAAGTACAAT GACGGCTTTT TCAGTTTCTA ACCCGACCTG TCGCTTAATT GCATTTGATT GGTTTGGGCA CGGATTATCT GATCATAAAG GCGTCGATCA TTTTTATCAT TTTTTTGATT ATGTTGATGA TCTTCATCAG GCGATACTGT CTTTAAAACT AGATAGCGTT ATTTTGGTGG GGCATTCATT GGGCGGGTTG ATTGCGAGTG CTTATAGCGC GGCTTTTCCT GAAAAAGTGG CTGCATTAAT GATGATAGAA GCATTAGGCC CTTTAAGTGA AGAGGCGGAG AAAACATCCG AACGATTACG TGAAGGTGTA TTAAGTCGTC AGCGTTATCG TCATAAGCCA CAAAGAACAT TAAAAGATAG GCAAGCAGCG TTAGCGTTGC GCTCTAAGGT AAACCAATTA CCAGAAGTGT TATTAGAACC TATAATGCAA AGAGCAGTAC GTTCAACCTC TGATGGGGTG CAGTGGACGA CGGATGCGAA AGTAAAATGC GAATCTTTGT ATCGAATGTC AGAAGCCCAC GCATTGGCTC TACTGTCTGA TATAACATGT CCCGTGATTG TCATTATTGG GGTTGACGGG TATGAACATT TAAAGCAAAA AGAGCATCGC TATTCTTATA TTCAACACGT TGAGTCTTTT CAAATCGAGG GTGGGCATCA TTGTCATTTA CAACACCCGG AAAAAATATC AACGTATTTA AATGTGTTAT TTAACAAAAT TAATACTTAA
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Protein sequence | MHAFHQYDLS LHHGSLAVIE LGPNNADNVV LFLHGWQDNA ATFLSTMTAF SVSNPTCRLI AFDWFGHGLS DHKGVDHFYH FFDYVDDLHQ AILSLKLDSV ILVGHSLGGL IASAYSAAFP EKVAALMMIE ALGPLSEEAE KTSERLREGV LSRQRYRHKP QRTLKDRQAA LALRSKVNQL PEVLLEPIMQ RAVRSTSDGV QWTTDAKVKC ESLYRMSEAH ALALLSDITC PVIVIIGVDG YEHLKQKEHR YSYIQHVESF QIEGGHHCHL QHPEKISTYL NVLFNKINT
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