| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0892 |
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| Symbol | proS |
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| ID | 6986711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 992979 |
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| End bp | 994694 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643379293 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_002262396 |
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| Protein GI | 209694468 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.32096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACTA GCAAATACCT TCTTTCAACA CTGAAGGAGA CTCCAAACGA CGCAGAAGTA
GTGAGCCACC AGCTCATGCT ACGTGCAGGT ATGATCCGTC GTCTAGCTTC AGGTTTATAT
ACTTGGCTAC CGACTGGTCT ACGTGTATTG CGTAAAGTCG AAAATATCGT TCGTCAAGAG
ATCGACAATG CAGGTGCAAT CGAAACGTTG ATGCCCGTAG TTCAGCCGTT TGAGCTTTGG
GAAGAAACAG GCCGTTCTGA AGAGATGGGG CCTGAACTGC TTCGTTTTAC TGACCGTCAT
GCTCGTCCAT TTGTACTTAG CCCAACGGCT GAAGAAGTTA TCACTAGCCT TGTGCGTAAC
GAAGTGAACT CTTACAAGCA ACTTCCGCTA AACCTATACC AAATCCAAAC TAAATTCCGT
GATGAACGTC GTCCACGCTT TGGTGTAATG CGTGCACGTG AATTCTGCAT GATGGATGCG
TACAGCTTCG ATATCGATAA AGAAGGCCTA CAAAAGTCTT ACGATGCGAT GCACGATGCT
TACTGCAGAG CATTCGACCG TATGGGTCTT GAGTACCGTC CAGTATTGGC TGACTCAGGC
GCTATCGGCG GCAGTGGTTC TCAAGAGTTC CACGTACTTG CAGAAAGCGG CGAAGATTTA
ATCGCATTCT CAACAGAATC TGATTACGCT GCAAACATCG AAAAAGCAGA AGCACTAGCA
CCGACAACTG AACGTGCTGC TCCTACTCAA GAGATGACAA CGGTTGATAC ACCAAATGCA
AAAACAATTG CAGAATTGGT TGAGCAACAC GGTATCGCAA TTGAAAAAAC AGTGAAAACA
TTATTTGTTA AAGCATCTGA TGAAGTTGAT GCTGATATCA TTGCACTTAT CATCCGTGGT
GATCACGAGC TTAACGAAGT TAAAGCTGAA AACCTTCCAC ACGTTTTATC TCCACTAGAG
ATGGCTGACG AAGCACAACT TCGTGATCTA ATCGGTGCTG GTGCTGGTTC TCTTGGTCCT
GTAGGCCTAG AACTGCCATT CATCGTTGAC CGCTCTGTTG CGGTAATGAG TGATTTTAGT
ACAGGCGCAA ACATCGATGG TAAACACTTC TTTGGTGTGA ACTGGGATCG TGATGTACAG
CTTGGTCAAA TTGAAGATTT ACGCAGCGTA GTTGAAGGTG ACCTAAGCCC ATGTGGCCAA
GGTACTCTAC AACTGAAACG CGGTATCGAA GTCGGTCACA TCTTCCAATT AGGTACAGCC
TACTCAGAAG CAATGAACTG TGGCGTACTT GATGCTAACG GTAAAAACTC TATCCTTGAG
ATGGGTTGTT ACGGTATCGG TGTTTCACGT GTTGTTGCAT CAGCTATCGA GCAAAACAAT
GACGAATACG GCATTGTATG GCCAGAAGCG CTTGCACCAT TTACGGTTGC TATCGTTCCA
ATGAACATGT ACAAATCTGA TCGCGTTAAA GAAGCGGCAG AAAAACTGTA TGCAGAATTA
ACAGCGATGG GTATCGACGT TCTATTTGAT GATCGTAAAG AGCGCCCAGG TGTTATGTTC
AAGGATATCG AGCTTATCGG TATTCCACAT ACCGTTGTGA TCGGCGATCG TAGCATGGAC
GAAGGTAACT TTGAGTATAA GAACCGTCGT GCAAACAGCA AAGAAGTAAT CGAAATTGCA
AACATCGTTG AGCACATTAA AGCACAACTA AGCTAA
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| Protein sequence | MRTSKYLLST LKETPNDAEV VSHQLMLRAG MIRRLASGLY TWLPTGLRVL RKVENIVRQE
IDNAGAIETL MPVVQPFELW EETGRSEEMG PELLRFTDRH ARPFVLSPTA EEVITSLVRN
EVNSYKQLPL NLYQIQTKFR DERRPRFGVM RAREFCMMDA YSFDIDKEGL QKSYDAMHDA
YCRAFDRMGL EYRPVLADSG AIGGSGSQEF HVLAESGEDL IAFSTESDYA ANIEKAEALA
PTTERAAPTQ EMTTVDTPNA KTIAELVEQH GIAIEKTVKT LFVKASDEVD ADIIALIIRG
DHELNEVKAE NLPHVLSPLE MADEAQLRDL IGAGAGSLGP VGLELPFIVD RSVAVMSDFS
TGANIDGKHF FGVNWDRDVQ LGQIEDLRSV VEGDLSPCGQ GTLQLKRGIE VGHIFQLGTA
YSEAMNCGVL DANGKNSILE MGCYGIGVSR VVASAIEQNN DEYGIVWPEA LAPFTVAIVP
MNMYKSDRVK EAAEKLYAEL TAMGIDVLFD DRKERPGVMF KDIELIGIPH TVVIGDRSMD
EGNFEYKNRR ANSKEVIEIA NIVEHIKAQL S
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