Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0864 |
Symbol | glyA |
ID | 6986692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 965183 |
End bp | 966433 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643379266 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_002262369 |
Protein GI | 209694441 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | [TIGR01563] phage head-tail adaptor, putative, SPP1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAAGC GTGATATGAA CATTGCAGAT TACGATGCAG ACTTGTTTGC AGCAATCCAG GAAGAGACAG TACGTCAAGA AGAGCATATC GAGCTGATTG CTTCTGAAAA CTACACTAGC CCACGAGTGA TGGAAGCTCA AGGTTCACAA CTAACAAACA AGTATGCTGA AGGTTACCCT GGTAAGCGTT ACTACGGTGG CTGTGAGTTC GTTGATAAAG TGGAAACACT GGCTATCAAC CGTGCATGTG AATTGTTTGG CGCAGAGTAC GCAAACGTAC AACCGCATTC AGGTTCTCAA GCGAACAATG CCGTTTACAT GGCACTACTA AACGCTGGCG ATACCGTGTT AGGTATGAGC CTTGCTCACG GTGGTCACTT AACTCACGGT TCTCCAGTAA ACTTCTCTGG TAAGCTTTAC AACATCATTC CTTACGGTAT TGATGAAGCG GGTCAAATTG ACTACGAAGA AATGGAAGCG CTAGCAATAG AACATAAACC TAAGATGATC ATCGGTGGTT TCTCTGCTTA CTCTCAAATT TGTGATTGGG CGCGTATGCG TGAAATCGCA GACAAAGTTG GTGCTTACTT TTTCGTTGAT ATGGCTCACG TAGCGGGTCT TATTGCTGCT GGTGTTTACC CTAACCCTGT CCCACACGCT CACGTAGTAA CAACAACAAC GCATAAAACA TTGGCTGGTC CTCGTGGTGG TCTTATTCTT TCTAACGAAG GCGAAGATCT TTACAAGAAA CTGAACTCAG CAGTATTCCC TGGTGGTCAA GGTGGCCCTC TAATGCACGT TATCGCTGGT AAAGCGGTGG CATTTAAAGA AGCACTAGAA CCAGAATTTA AAGAATACCA AGTTCGTGTT GTTGCTAATG CAAAAGCAAT GGTTGCAGAG TTTCTTGCTC GTGGTTACAA CATCGTTTCA GGCTCTACTG AAAACCACTT GTTCTTGGTT GATTTAATCG ACAAAGACAT CACTGGTAAA GAAGCCGATG CGGCTCTGGG TTCAGCTAAC ATTACCGTGA ATAAAAACTC AGTACCAAAC GATCCACGTA GCCCGTTTGT TACTTCTGGT ATCCGTGTTG GTTCTCCTTC AATTACTCGT CGTGGTTTCT CTGAAGAAGA CGCGAAGAAC CTTGCTGGCT GGATGTGTGA CATTCTAGAC AACATGGGTG ATGAGTCTGT TATCGAAGCA ACTAAAGCGA AAGTATTAGA AATCTGTAAG CGTTTACCTG TATACGCTTA A
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Protein sequence | MLKRDMNIAD YDADLFAAIQ EETVRQEEHI ELIASENYTS PRVMEAQGSQ LTNKYAEGYP GKRYYGGCEF VDKVETLAIN RACELFGAEY ANVQPHSGSQ ANNAVYMALL NAGDTVLGMS LAHGGHLTHG SPVNFSGKLY NIIPYGIDEA GQIDYEEMEA LAIEHKPKMI IGGFSAYSQI CDWARMREIA DKVGAYFFVD MAHVAGLIAA GVYPNPVPHA HVVTTTTHKT LAGPRGGLIL SNEGEDLYKK LNSAVFPGGQ GGPLMHVIAG KAVAFKEALE PEFKEYQVRV VANAKAMVAE FLARGYNIVS GSTENHLFLV DLIDKDITGK EADAALGSAN ITVNKNSVPN DPRSPFVTSG IRVGSPSITR RGFSEEDAKN LAGWMCDILD NMGDESVIEA TKAKVLEICK RLPVYA
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