Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0852 |
Symbol | znuA |
ID | 6989443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 948604 |
End bp | 949497 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643379256 |
Product | high-affinity zinc uptake system protein ZnuA precursor |
Protein accession | YP_002262359 |
Protein GI | 209694431 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4531] ABC-type Zn2+ transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0338292 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAA AAAATCAATT TATTGCCTTA TGTTTATGTA CATTGCTAAG CGCTCAAGCT CAAGCAATGA ACGTGTTGTC ATCAGTGAAA CCGATTAACC TAATCGTGCA AGAACTGACA AATGGCGTAT CGGAATCCTC TTACTTGGTT CCACAAAGTG CTTCTCCACA TGATTATGCA TTACGTCCTT CTGACATTAA AAAAATAAAA AATGCCGATA TGATCATTTG GTACGGAAAT GATTTAGAAC CTTTCCTAAG TAAAGTGTTA GCGGACCAAA AAAATGTCAT CACCATCAGT GAATTTAGTT CGGTTGATTT TTATCACTTT GACCAACATG GGGATGACGC TCATGCCGAA GAAAGCGGGC ACCATCACAA TACTGATCCG CATTTTTGGT TAGGCCCAAA AGAAGCTTTG GGTGTAGCAA AAGAGATAAC GGTTCAATTG ATTAAAATTG ATCCATTGAA TAAAGACCAA TATAAGTCTA ATCTTGCAGC CTTTGAAAAT AAGTTAGCAC AGGCTGTGGA GACTATTTCA AAGCAATTAA AACCAGTGCA GAGTAAAGGC TACTTTGTTT TTCATGACGC ATATGGTTAT TTTGAACGTT ATTTTGGAAT GAATAACTTG GGGCACTTTA CGGTGAGTCC GGATAGAAAA CCGGGTGCAA AAACTTTGAT TAATATAAAA AAATCACTTT TAAATCAACA AGCGGTATGT GTTTTTTCTG AACCTCAGTT TGAACCGGCA ATTGTGACTA CAATTACCAG AGGAACAGAA GTGCATAAAG GGGAACTTGA TCCTTTAGCC ATACAGCAAG CGGATGAAAA TGGGGCTTAT TTTATATTTC TATCAACCAT CAGTAATGAG TTATCACGTT GTCTAAGTCA ATAA
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Protein sequence | MSKKNQFIAL CLCTLLSAQA QAMNVLSSVK PINLIVQELT NGVSESSYLV PQSASPHDYA LRPSDIKKIK NADMIIWYGN DLEPFLSKVL ADQKNVITIS EFSSVDFYHF DQHGDDAHAE ESGHHHNTDP HFWLGPKEAL GVAKEITVQL IKIDPLNKDQ YKSNLAAFEN KLAQAVETIS KQLKPVQSKG YFVFHDAYGY FERYFGMNNL GHFTVSPDRK PGAKTLINIK KSLLNQQAVC VFSEPQFEPA IVTTITRGTE VHKGELDPLA IQQADENGAY FIFLSTISNE LSRCLSQ
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