| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0846 |
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| Symbol | sucA |
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| ID | 6989227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 940625 |
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| End bp | 943441 |
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| Gene Length | 2817 bp |
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| Protein Length | 938 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643379250 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_002262353 |
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| Protein GI | 209694425 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAATA GCGTGATGAA GGCATGGTTT GAGTCTTCAC ATTTAGCTGG CGCTAATGCA
ACGTACGTAG AAGAACTCTA CGAACTCTAT CTCAGTGACC CGGAAATCGT TAGCGATGAA
TGGAGAGAAG TTTTTGATAC ACTTCCAGTT GAGAATACTG GTGTATCAGA ACAAGCCCAT
TCCCCTGTAC GAGATTATTT CCGTCGTCTT GCGAAAGAAA CAAAGCAAGT TAGTGCTCAA
GTTAATGATC CAGATGTAGA TGCTAAGCAA GTACGTGTTT TGCAGTTAAT TAATGCATAC
CGTTTCCGTG GTCACCAAAA TGCGAATTTA GACCCATTAG AGCTACAACA ACATGAATAT
GTTGCAGAGT TAGAACCTGC TTTTCATAAT CTAACTGACG CCGATTTCTC CGAAACGTTT
AATGTTGGTT CTTTTGCTTC TGGGCAAGAG ACAATGAAGC TTTCTGATTT GTATGAAGCA
CTACGAGGCA CTTATTGTGG TTCTGTTGGT GCAGAATACA TGCATATCAC TAATACAGAA
GAGAAACGTT GGATCCAACA ACGTTTAGAA TCTGTTGCGG GTAAACCAAC ATTTACGCCT
CAAGAAAAGT TAACCTTCCT TGAGGAGCTA ACTGCCGCCG AAGGGCTAGA GCGTTACTTA
GGAGCTAAAT TCCCTGGCGC CAAACGATTC TCATTGGAAG GTGGCGATGC CATGGTTCCG
ATGGTGAAAG AAATTATTCG CCGTGGTGGT GAAAATGGAT GTCGTGAAAT CGTTATCGGA
ATGGCTCACC GTGGACGTTT GAATATGTTA ATCAACGTCC TTGGTAAAAA ACCTCAAGAC
TTATTCGATG AATTTGCGGG TAAACATGGC GAATCATGGG GTACTGGTGA TGTAAAATAT
CATCAAGGTT TCTCTTCTGA TTTTGCTACG CCAGGTGGTA ATGTTCACCT AGCTCTAGCG
TTTAATCCCT CTCATCTTGA AATTGTTAAC CCTGTAGTTA TCGGTTCAGT TCGTGCTCGT
CAAGATCGTT TGAATGATGC CGCAGGTGAC AAAGTCATTC CAATTACTAT CCATGGTGAT
TCTGCGATTG CGGGTCAAGG TGTGGTGGCT GAAACATTCA ATATGTCTCA GGCTCGTGCA
TTCCATGTTG GTGGTACGAT TCGTATTGTT ATTAATAACC AAGTTGGTTT TACAACATCG
AATCCTAAAG ATATGCGTTC AACGCAGTAT TGTACTGATA TTGCTAAAAT GGTTCAGGCA
CCGATTTTCC ATGTGAATGC GGATGATCCT GAAGCGGTTG CTTTTGTTAC TCGTATTGCT
CTTGATTATC GTAATGAATT CAAACGTGAT GTTGTGATTG ATTTAGTTTG TTATCGCCGT
CATGGTCATA ACGAAGCTGA TGAACCAAAT GCAACTCAGC CATTGATGTA TCAAAAAATC
AAAAAACATC CCACGCCTCG TAAGTTGTAT GCAGATACAT TGATTGCGCG TCAAGATCTT
GAGCTAGAAA CAACGACACA ATTGATCAAT GAGTATCGTG ATGCACTTGA CCATGGTGAA
GTCGTGGTTA AAGAGTGGCG TCCAATGCAA CTGCATAACG TTGACTGGAC TCCATTTCTC
GGTCATGACT GGAATATTGA ATGGGACAAT AAATTCGATA AAACTCGTTT AGTTGAGCTT
GGTCAGCGTG TTTGTCAGTA TCCAGAGAGT CATAAATTAC ACAGTCGTGT AAATAAGATG
TGTAATGACC GTATCTCTAT GGTTGCTGGT GAAAAAGCCA TTGATTGGGG CATGGCTGAA
ACATTAGCTT ATGCAACATT AGTTGATGAA GGCCAGCGAA TTCGTATTAC TGGACAAGAT
TCAGGCCGTG GTACTTTTTT CCACCGTCAT GCTGTACTGC ATAATCAATC TGATGCGAGT
ACGTATGTTC CGTTGGCAAA TATTCATGAT AAGCAAGGCC CATTTGAAGT ACATGATTCC
GTGCTTTCAG AAGCGGCGGT ACTTGCGTTT GAATATGGTT ATGCAACGGC AGAACCAAGT
GGTTTAACCA TTTGGGAAGC ACAATTTGGT GATTTTGCTA ACTGTGCTCA AGTGGTTATT
GACCAATTTA TCTCTTCTGG TGAGCAAAAA TGGGGTCGTA TGTGCGGTCT TACAATGCTA
TTACCTCACG GTTATGAAGG TCAAGGTCCT GAGCATTCAT CTGCACGACT TGAGCGTTTC
TTACAAATGT GTGCTGAACA AAATATGCAA GTTGTTGTTC CATCAACACC TGCACAGGTT
TACCACATGC TGCGCCGTCA AGTTGTTCGT CCAATGCGTC GTCCATTGAT CGTAATGTCA
CCGAAATCAT TACTACGTCA TCCTTTATGT ACATCGTCAC TAGAAGATCT TGCTGAAGGT
AATTTCCAAC CAGCAATCCC TGAAATCGAT GCACTGGATC CTGCGTTAGT TAAACGCGTC
GTGTTCTGTT CTGGTAAGGT TTATTTTGAT CTTTTAGAGC AGCGTCGTAC TAATGAACAG
AATGATGTTG CTATTGTTCG TATTGAGCAG CTTTACCCAT TCCCTAAAGA AGACGTAGAA
GCCGCCATCG CACAATATAC AAATGTAGTG GATTATGTTT GGTGTCAAGA AGAGCCACAA
AACCAAGGTG CTTGGTACTC AAGCCAACAT AACTTCCGTT CAGCATTACC TGCGAGCGCA
ATATTACACT ATGCAGGACG TCCAGCGTCT GCCTCTCCGG CAGTTGGCTA TATGTCAGTG
CACGTGAAAC AACAAAAAGC GTTAGTTGAA GACGCTCTGA CCCTAGATAA GAACTAG
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| Protein sequence | MQNSVMKAWF ESSHLAGANA TYVEELYELY LSDPEIVSDE WREVFDTLPV ENTGVSEQAH
SPVRDYFRRL AKETKQVSAQ VNDPDVDAKQ VRVLQLINAY RFRGHQNANL DPLELQQHEY
VAELEPAFHN LTDADFSETF NVGSFASGQE TMKLSDLYEA LRGTYCGSVG AEYMHITNTE
EKRWIQQRLE SVAGKPTFTP QEKLTFLEEL TAAEGLERYL GAKFPGAKRF SLEGGDAMVP
MVKEIIRRGG ENGCREIVIG MAHRGRLNML INVLGKKPQD LFDEFAGKHG ESWGTGDVKY
HQGFSSDFAT PGGNVHLALA FNPSHLEIVN PVVIGSVRAR QDRLNDAAGD KVIPITIHGD
SAIAGQGVVA ETFNMSQARA FHVGGTIRIV INNQVGFTTS NPKDMRSTQY CTDIAKMVQA
PIFHVNADDP EAVAFVTRIA LDYRNEFKRD VVIDLVCYRR HGHNEADEPN ATQPLMYQKI
KKHPTPRKLY ADTLIARQDL ELETTTQLIN EYRDALDHGE VVVKEWRPMQ LHNVDWTPFL
GHDWNIEWDN KFDKTRLVEL GQRVCQYPES HKLHSRVNKM CNDRISMVAG EKAIDWGMAE
TLAYATLVDE GQRIRITGQD SGRGTFFHRH AVLHNQSDAS TYVPLANIHD KQGPFEVHDS
VLSEAAVLAF EYGYATAEPS GLTIWEAQFG DFANCAQVVI DQFISSGEQK WGRMCGLTML
LPHGYEGQGP EHSSARLERF LQMCAEQNMQ VVVPSTPAQV YHMLRRQVVR PMRRPLIVMS
PKSLLRHPLC TSSLEDLAEG NFQPAIPEID ALDPALVKRV VFCSGKVYFD LLEQRRTNEQ
NDVAIVRIEQ LYPFPKEDVE AAIAQYTNVV DYVWCQEEPQ NQGAWYSSQH NFRSALPASA
ILHYAGRPAS ASPAVGYMSV HVKQQKALVE DALTLDKN
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