Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0831 |
Symbol | nagE |
ID | 6988877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 926109 |
End bp | 927599 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643379235 |
Product | PTS permease for N-acetylglucosamine and glucose |
Protein accession | YP_002262338 |
Protein GI | 209694410 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific [COG1264] Phosphotransferase system IIB components |
TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component [TIGR01998] PTS system, N-acetylglucosamine-specific IIBC component |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATATTT TAGGAAAGTT TCAAAAAGTA GGTAAAGCAC TGATGGTACC AGTTGCTACA TTACCTGCAG CGGCCATTTT AATGGGTATT GGTTACTGGA TTGATCCGGT GGCTTGGGGC GGCAATAGTG CATTAGCAGC GTTTTTAATC AAAGCTGGTG CGTCTATTAT TGATAACATG TCTGTACTAT TCGCAATTGG TGTTGCTTAT GGTATGTCTA AAGATAAAGA TGGTGCAGCG GCACTTTCTG GTTTTGTTGG TTTCCTTGTT GTAACGAATC TTCTTTCACC AGGTGCGGTA GCTCAAATTC AAGGCATTGA TCCTGCTGCT GTTCCTGCTG CTTTTAGTAA GATCAACAAC CAATTTGTTG GTATTTTAGT TGGTATCATA TCTGCTGAAA TTTACAACCG TTTCTCTGCT GTTGAATTGC ATAAAACACT TGCATTCTTC TCAGGTAAAC GTCTTGTACC TATTCTAACG TCATTTGCAG GTATTTTAAT TGCGTTCGTG CTTATGTACG TATGGCCAGC AATCTACGAT GGTCTTGTTC ACTTCGGCGA ATCAATTCAA GGTATGGGTG CTACGGGTGC AGGTATCTAT GCATTCTTCA ACCGTCTATT GATTCCTGTA GGTCTTCACC ATGCACTTAA CTCAGTGTTC TGGTTCGACG TTGCTGGTAT TAACGACATC CCTAACTTCC TAGGTGGCGC TAAGTCTATC GCTGAAGGTA CTGCAACTGT CGGTGTTACC GGTATGTACC AAGCTGGTTT CTTCCCAATC ATGATGTTTG GTCTACCAGG CGCAGCACTA GCTATCTACC ACACTGCAAA AGTTGAGAAC AAAGAAAAAG TAGCATCGAT TATGATCGCT GCAGGTTTCG CATCGTTCTT TACGGGTGTA ACTGAACCTC TAGAATTCTC ATTCATGTTC CTTGCTCCTG CATTGTATGT AGTTCACGCA GCATTGACGG GTATCTCTGT ATTCATCGCA GCATCTATGC ATTGGATTGC AGGCTTCGGT TTCTCTGCCG GCCTAGTTGA TATGGTTCTT TCTAGTCGTA ACCCACTAGC GGTTAATTGG TATATGCTAA TTATCCAAGG TATCGTTTTC TTCGCTCTAT ACTACTTTAT CTTCCGCGCT GTAATCCTTA AGTTTAACCT TAAGACTCCA GGACGTGAAG ACGATGATGA AGAAGAAAGC TCAATCCGTG GTTCTAAAGA AACTGGTGAA CTAGCTAAGC AATACCTTAA AGCGCTTGGT GGTCACGACA ATATAGAAAA CATTGATGCT TGTATTACTC GTTTACGCTT AACTCTTAGA GATACTAGCG TAATCAGCGA GAAGCAACTT AAAGGTCTTG GTGCAATGGG TGTTGTTAAA CTTGGTTCAA ACAATGTTCA AGTTATCCTA GGTCCTCTTA CTGAAATCGT TGCTGGTGAA ATGAAAAAAA TCCCAGCGTC TGAAGACTTA ACAGCAGTTG CACTACCATA A
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Protein sequence | MNILGKFQKV GKALMVPVAT LPAAAILMGI GYWIDPVAWG GNSALAAFLI KAGASIIDNM SVLFAIGVAY GMSKDKDGAA ALSGFVGFLV VTNLLSPGAV AQIQGIDPAA VPAAFSKINN QFVGILVGII SAEIYNRFSA VELHKTLAFF SGKRLVPILT SFAGILIAFV LMYVWPAIYD GLVHFGESIQ GMGATGAGIY AFFNRLLIPV GLHHALNSVF WFDVAGINDI PNFLGGAKSI AEGTATVGVT GMYQAGFFPI MMFGLPGAAL AIYHTAKVEN KEKVASIMIA AGFASFFTGV TEPLEFSFMF LAPALYVVHA ALTGISVFIA ASMHWIAGFG FSAGLVDMVL SSRNPLAVNW YMLIIQGIVF FALYYFIFRA VILKFNLKTP GREDDDEEES SIRGSKETGE LAKQYLKALG GHDNIENIDA CITRLRLTLR DTSVISEKQL KGLGAMGVVK LGSNNVQVIL GPLTEIVAGE MKKIPASEDL TAVALP
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