| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0826 |
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| Symbol | rfaH |
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| ID | 6986680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 919200 |
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| End bp | 919697 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 643379230 |
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| Product | transcriptional activator RfaH |
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| Protein accession | YP_002262333 |
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| Protein GI | 209694405 |
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| COG category | [K] Transcription |
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| COG ID | [COG0250] Transcription antiterminator |
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| TIGRFAM ID | [TIGR01955] transcriptional activator RfaH |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACTGT GGTATTTACT TTATTGTAAA CGTGGAGATC AGCAACGAGC AAAGTTGCAT
CTAGAAAATC AGAATGTAGA GTGTTTTTAT CCTGAAATTG ACGTCGAAAA GATGATAAGG
GGAAAACGAA CGACAGTGAA GGAGCCTTTA TTTCCTTGTT ATATGTTCGT AAGGTTTGAT
TTTACTGTTG GACCGACCTT TACGACGATT CGTTCAACAC GTGGTATTAG TGATTTTGTG
CGTTTTGGGT CACAACCTAC CGTTTTAAAT GGTGATCTTA TTTATTCATT AAAGCAATTA
GGTGAAAATC TGCATCATAA AAAAACCATA GAGTGCTTGC CTGAAAGTGG ACAAAAAGTA
GATATTATCG AAGGGCCATA TACTGGGATT GATGCTATTT ATAAAGAAGC AGATGGAGAA
ATGCGTTCAA TTCTTTTGAT TACATTAATA AATAAAAAAG TAGAAATAAA AATAGAAAAT
ATTAATGTGG GTTTCTAA
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| Protein sequence | MKLWYLLYCK RGDQQRAKLH LENQNVECFY PEIDVEKMIR GKRTTVKEPL FPCYMFVRFD
FTVGPTFTTI RSTRGISDFV RFGSQPTVLN GDLIYSLKQL GENLHHKKTI ECLPESGQKV
DIIEGPYTGI DAIYKEADGE MRSILLITLI NKKVEIKIEN INVGF
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