| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0805 |
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| Symbol | |
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| ID | 6986672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 894931 |
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| End bp | 895758 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643379211 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_002262315 |
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| Protein GI | 209694387 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGCG CTATTTTTAT CACTGGTTGT TCAACTGGCA TTGGTTACAC CACCGCTCAT
CAACTCTCAA AACATGGTTT TCATGTCATT GCTTCATGCC GTAAAAAAGA AGACGTTTTA
CGATTGCAAA ATGAAGGATT AACGTGCTTA CACTTAGATT ATTCGGACTC AGAGAGCATT
TCTCTGGCGG TCAGCGAGTT ATTAGCACTT ACTGATGGAA AGTTGTACGC TTTATTCAAT
AATGGCGCGT ATGGACAAGC GGGTGCACTG GAAGATCTGC CTAGAGAGGC ACTAAAAGAG
CAGTTTGAAG CAAACTTCTT TGGTTGGCAT CAGTTAGTAA TAGAGTTACT ACCAATAATG
AGAAAGCAAG GCTATGGAAG GATCATACAA AACAGCTCAG TACTTGGCAT TGTGGCGATG
AAATACCGTG GTGCATACAA TTCTTCAAAA TTCGCAATTG AAGGTTGGAG CGATACATTA
CGTTTAGAGT TAATGCAGAC TAATATCCAG ATCAGTTTAA TTGAACCCGG TCCTATCGAG
ACAAACTTTA GATCTAATGC ATTGAAAGCA TTTAAAAAAT GGGTAACTAT CGAGAATAGT
CCACATAAAG AAAAATACCT TATGCAACAA CAGCGGTTAG AGAAAGAAGC CTCCGGAAGT
GCCTTTGTAC TCCCTCCTGA ATCGATTATG TCACCATTGC TTCATGCACT TAATAGCAAA
AAACCTAAAG CACGATATAG AGTTACCTTT CCTACTCATT TATTTGCAAT ATTAAAACGA
TTATTACCAA CTAAGTGGTT AGATATGATC TTAAATAAGA GTGACTAA
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| Protein sequence | MQRAIFITGC STGIGYTTAH QLSKHGFHVI ASCRKKEDVL RLQNEGLTCL HLDYSDSESI
SLAVSELLAL TDGKLYALFN NGAYGQAGAL EDLPREALKE QFEANFFGWH QLVIELLPIM
RKQGYGRIIQ NSSVLGIVAM KYRGAYNSSK FAIEGWSDTL RLELMQTNIQ ISLIEPGPIE
TNFRSNALKA FKKWVTIENS PHKEKYLMQQ QRLEKEASGS AFVLPPESIM SPLLHALNSK
KPKARYRVTF PTHLFAILKR LLPTKWLDMI LNKSD
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