| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0792 |
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| Symbol | |
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| ID | 6988647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 878453 |
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| End bp | 878833 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643379197 |
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| Product | protein SirB, invasion gene expression up-regulator |
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| Protein accession | YP_002262302 |
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| Protein GI | 209694374 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3094] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.101967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATACCG CTGTTAAACA CATTCACTTA TTTATGATCG CTTGTAGCGT ACTATTATTT
ATCGTTCGTT ATGCGTTAAT GATGGTTGAT TCCGATCTTC GTAATAAAGC TTTTTTTAAA
CGAGTGCCTC ACGTTGTTGA TACGGCAATG CTATTAAGTG GCGTTGCACT TATTTTTATT
ACTGGATTCA TTCCATTTAC AGGTGCGGCT CCTTGGTTAA CTGAGAAATT GACTTGTGTT
TTGGTTTATA TCGCTCTGGG GTTTGTCACT CTAGGAAACA GTAAAAACAA AGTATTTAAA
ACATTTGCCT TTCTTGGCGC ATTAGGTTGG TTAATGGTTG CAGCTAATAT TGCGATGACG
AAAGCAACAT TTCTGGGGTA A
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| Protein sequence | MYTAVKHIHL FMIACSVLLF IVRYALMMVD SDLRNKAFFK RVPHVVDTAM LLSGVALIFI
TGFIPFTGAA PWLTEKLTCV LVYIALGFVT LGNSKNKVFK TFAFLGALGW LMVAANIAMT
KATFLG
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