Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0762 |
Symbol | |
ID | 6986644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | + |
Start bp | 851281 |
End bp | 852645 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643379161 |
Product | sodium-dependent transporter |
Protein accession | YP_002262278 |
Protein GI | 209694350 |
COG category | [R] General function prediction only |
COG ID | [COG0733] Na+-dependent transporters of the SNF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0994295 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACAG GTAACAGAGA AAGTTTTAGT TCACGATTAG GGTTTATATT ATCAGCTGCT GGTGCAGCGG TGGGTCTGGG TAATATTTGG GGCTTCCCAA CTCAGGCAGC AAGTAATGGT GGTGGTGCCT TTCTATTGGT TTATCTCATC ATGATCCTTG TGGTGGCTTT CCCTATGCTT GTTGTCGAAA TGGCGATCGG TCGTCATGGT CAAGCAAACC CAGTAGACAG TATGCGAGCT CTGACTTCAA ATCCAATGGG TAAGCGTTTT GGTGCTTTTG TTGGGTGGAT TGGTCTGAGT GTACCTAGTG TTGTACTGAT GTTTTATAGC ATTGTTGGTG GTTGGTTAAT CTGTTTTCTA TTTGGTGCGA TGGCCAATGT TGTTGGATTG CATGATCTCG CTGAGTGGTT TAAAGGTTTT AGCATTGAAC GTAATTTACT GGGTACGATA CTCTTTTATG TATTAACTAT TTTAATCGTA CAAGGTGGAA TTAAAGACGG TATTGAAAAA TGGTCTACTC GTTTGATGCC GGCATTATTT GTTTTATTTG GATTATTGTT TGTTTATATC ATGATGCAGC AGGGTGCTGT TGAAGGGCTA AAGCACTATC TGATTCCTGA TTTTGAAAAA GTAATGGATA AAAAATTGAT TCTAGCAGCC ATGGGGCAAG GCTTTTTCTC GCTAACCATT GGTGGCTGTT CAATGCTGAT TTACGGATCG TATTTAAGTA AGACAGAGAA TTTACCTAAA ATGGCGATGA ACGTTACTTT AGTGGATACC GCTGTGGCAT TTGTTGCGGG CTTAGTGGTT ATGCCTGCAA TGTTTGTTGC AATGCAAAAG GGCGTTCAAA TTTATGCCGA AGATGGATCG TTATTAAGTT CTGACACGTT GGTGTTTACG GTTTTACCAA TGATGTTTGA TAGCTTAGGT TTATTGGGCG ATCTGTTCGC CATTGCTTTC TTCTTATTAT TAACCATCGC TGCATTAACG TCTTCAATCT CAATGCTTGA ATGTTCAGTT TCTTTAGTGA GTGAGCGATT TGAAACGAGA AGAACACCAA CAAGCTGGGT ATTAGGTTTA TTAATTGCCG TGTTTAGTGT GGTGATTGTC TTTAATTTTT CTGAACTATT TGGCTTAGTT GCGATGATTG CAACGCAATA TTTACAACCT GTCGCAGCAT TATTGTTCTG TGTATTTGGT GGCTGGGTGT GGAGTCGTCA CTCTAAAATT AAAGAGCTTG AGCAAGGTTA TCCTGAATTC CAACAAGGAT TCTTTGGTAA AGTTTGGCCT CTGTATGTGA AATTTGTGTG TCCTGTTTTA GTTATCGCCG TATTGTGGGC ATCGTTCTTA TTCGCTTATA AATAA
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Protein sequence | MTTGNRESFS SRLGFILSAA GAAVGLGNIW GFPTQAASNG GGAFLLVYLI MILVVAFPML VVEMAIGRHG QANPVDSMRA LTSNPMGKRF GAFVGWIGLS VPSVVLMFYS IVGGWLICFL FGAMANVVGL HDLAEWFKGF SIERNLLGTI LFYVLTILIV QGGIKDGIEK WSTRLMPALF VLFGLLFVYI MMQQGAVEGL KHYLIPDFEK VMDKKLILAA MGQGFFSLTI GGCSMLIYGS YLSKTENLPK MAMNVTLVDT AVAFVAGLVV MPAMFVAMQK GVQIYAEDGS LLSSDTLVFT VLPMMFDSLG LLGDLFAIAF FLLLTIAALT SSISMLECSV SLVSERFETR RTPTSWVLGL LIAVFSVVIV FNFSELFGLV AMIATQYLQP VAALLFCVFG GWVWSRHSKI KELEQGYPEF QQGFFGKVWP LYVKFVCPVL VIAVLWASFL FAYK
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