Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0760 |
Symbol | rimK |
ID | 6986643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 849441 |
End bp | 850346 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643379159 |
Product | ribosomal protein S6 modification protein |
Protein accession | YP_002262276 |
Protein GI | 209694348 |
COG category | [H] Coenzyme transport and metabolism [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
TIGRFAM ID | [TIGR00768] alpha-L-glutamate ligases, RimK family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00088888 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCG GTATTTTATC TCGTAACCAA GACCTTTACT CTACTCGCCG TTTAATTGAA GCGGCGGAAA GCCGTGGTCA TGAAGTAAAA GTAATTGATG CATTACGCTG TTATATGAAT ATCAATTCAG AAAAACCTCA AATTCACTTC AAAGGTGAAG AACTGATTAA TTACGATGCG ATTATCCCTC GTATTGGCGC ATCAGTTACT TTTTATGGTA CTGCTGTATT ACGTCAATTT GAAATGATGA ATGTCTACCC GGTGAACGAA TCTGTTGCTA TCACTCGTTC TCGCGATAAA TTACGTTCAA TGCAACTGCT TTCTCGTAAA GGCATTGGTA TGCCAATCAC GGGTTTTGCA AGCAAGCCTG ATGATGTAAA AGATTTACTT GATATGGTTG GCGGCGGGCC AGTTGTGATC AAGCTCTTAG AAGGCACTCA AGGTATTGGT GTTGTTCTTG CAGAAACAAG AAAAGCAGCA GAAAGTGTTG TTGAAGCATT TATGGGCTTA AAAGCGAATA TTATGGTTCA AGAGTTCATC AAAGAAGCTG GTGGTGCAGA TATCCGTTGT TTCGTTATTG GTGGCAAAGT GATTGCAGCA ATGAAACGTC AAGGTGCAGA AGGCGAATTC CGTTCTAACC TACACCGTGG TGGTTCTGCG TCACTGGTTA AACTGACTCC AGAAGAACGT AAAACAGCAG TAGCAGCAGC AAATATCATG GGATTGAACG TAGCAGGTGT CGATTTACTT CGCTCTGATC GTGGTCCATT AGTTATGGAA GTGAACTCTT CACCTGGCTT AGAAGGCATT GAAGCCGCTA CAGGTAAAGA CGTTGCTGGT TTAATTGTTG ATTTTATTGA GAAAAATGCA GCGACAAAAG GGACTAAAAC TCGTGGCAAA GGCTAG
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Protein sequence | MKIGILSRNQ DLYSTRRLIE AAESRGHEVK VIDALRCYMN INSEKPQIHF KGEELINYDA IIPRIGASVT FYGTAVLRQF EMMNVYPVNE SVAITRSRDK LRSMQLLSRK GIGMPITGFA SKPDDVKDLL DMVGGGPVVI KLLEGTQGIG VVLAETRKAA ESVVEAFMGL KANIMVQEFI KEAGGADIRC FVIGGKVIAA MKRQGAEGEF RSNLHRGGSA SLVKLTPEER KTAVAAANIM GLNVAGVDLL RSDRGPLVME VNSSPGLEGI EAATGKDVAG LIVDFIEKNA ATKGTKTRGK G
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