Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0759 |
Symbol | |
ID | 6986642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 848387 |
End bp | 849481 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643379158 |
Product | hypothetical protein |
Protein accession | YP_002262275 |
Protein GI | 209694347 |
COG category | [R] General function prediction only |
COG ID | [COG3608] Predicted deacylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0635712 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCGAC AAAAGGGACT AAAACTCGTG GCAAAGGCTA GACAGAACAA AGCATTCGAC ATACTAACGT ATTCAGTTGC ACCCGGTGAA AGAAAGGTCA TTGAGATTGA AGCCGCAAAG CTTTATACCC ACTCACCTTT ATCTATCCCT GTAGAAATCA TTAATGGCCA GCATGCTGGC CCAATCCTGA TGGTCAATGC GGCCATTCAT GGTGATGAGC TCAATGGGGT TGAAATTGTT CGACAGTTAA TCAATAACAT TGACCCAAAA ACCCTAAAAG GCACTTTAAT TGCAGTGCCT ATTGTTAACG TTTTTGGTTT CATTCATAAA TCTCGTTATC TACCCGATCG CCGAGATTTA AACCGTTGCT TCCCAGGTTC AGAAAAAGGC TCTTTGGCAT CACGCATGGC AAATACCTTT TTCACCCAAA TAGCAAAACG TTGTGATTAT ATTGTTGACT TGCACACCGG AGCGATTCAT CGAACAAACT TACCTCAAAT TCGTGCCAAT CTAAGTAATC CTGAAACGTT ACGAATTGCA AAAGCATTCG CAACACCATT GATTGTAGAT TCGCCATTAC GAGATGGTTC GTTACGCAGT GAAGCTGAAC GTTGCGGTAT TCCAGTATTA ACATACGAAG CCGGTGAAGC ATTGCGCTTT GAACCGATAG CGATCAATGC TGGATATGTG GGTGTACAAC GAGTAATGCA ATCTATTGGT ATGTTAAAAG CCAGTAGAAA GCGCTTACCA ACAGCCATTA TTGCGAAATC AACTGGCTGG CTTAGAGCAG AAAGCGACGG TATCTTACGT ACTATCGTGA CACTCGGTGA GCAAGTTGAA AAAGATCAAG TTCTTGCTTA TATCAGTGCG CCACTTGGCC ACGGTGAGAT CGAGATTATC GCACATAAAG GTGGCATCGT TATTGGCCAA CAAACATTAC CATTAGTTAA TGAAGGGGAC GCTATTTTCA ATTTAGCTTA CTTTTCTGAA GATGATGAGA TGGTCGGTCA AACAGTTGAA ACGTACATCG ATGAAATGAT TGATGCCGAT ACTGATCAAC TAACGAATGG GCAGATCACA ACATCTACCC TTTGA
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Protein sequence | MQRQKGLKLV AKARQNKAFD ILTYSVAPGE RKVIEIEAAK LYTHSPLSIP VEIINGQHAG PILMVNAAIH GDELNGVEIV RQLINNIDPK TLKGTLIAVP IVNVFGFIHK SRYLPDRRDL NRCFPGSEKG SLASRMANTF FTQIAKRCDY IVDLHTGAIH RTNLPQIRAN LSNPETLRIA KAFATPLIVD SPLRDGSLRS EAERCGIPVL TYEAGEALRF EPIAINAGYV GVQRVMQSIG MLKASRKRLP TAIIAKSTGW LRAESDGILR TIVTLGEQVE KDQVLAYISA PLGHGEIEII AHKGGIVIGQ QTLPLVNEGD AIFNLAYFSE DDEMVGQTVE TYIDEMIDAD TDQLTNGQIT TSTL
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