Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VSAL_I0757 |
Symbol | chiA |
ID | 6986641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Aliivibrio salmonicida LFI1238 |
Kingdom | Bacteria |
Replicon accession | NC_011312 |
Strand | - |
Start bp | 845055 |
End bp | 847595 |
Gene Length | 2541 bp |
Protein Length | 846 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643379156 |
Product | endochitinase ChiA |
Protein accession | YP_002262273 |
Protein GI | 209694345 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3469] Chitinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGGA TTTTCATTAA CAGTGCTATT GCCTCTGCCC TTTTTATTTC ATACGGAGCC AATGCTTTTG ATTGCAGTTC ACTCCCTCTT TGGCAAAATT CAGAACCCTA CAGCGGTGGT GCTGAAATAC AACAAAATCA GATTGCATAC CAAGCACAAT GGTGGTCCCA AGGAAATTCA CCAGAAACAC ATTCAGGTGA ATGGCAAAAA TGGAAACGTT TAGGTCAATG CGATAATAGT GGCGGGAATA CCGCACCAAC ACTGTCGATC ATCTCCCCCT TAAATAATGC TGCGATTGCA GAAGGAAGTG CCATCACATT ACAAGCCAAT GCAGTGGATA GTGACGGAGA AATTACTCGT GTTGAATTTT TAGCGGATAG CCAATCCATT ACGATAATCA CCGCCCCACC GTATAACACG GATTGGGTAG CACTAAAAAA CACGACATCA ATTTCAGTGA TCGCTACTGA TAATGAAGGC AGTTCAACGA CTGAATCCGT CTCTATTCGC GTACAATCAA CCGGGGATTT AATCCCACCA TCAATACAAC TTCTCTCACC AACGGGCAAT GAAGTTCTCT CTGTCGGCGA TGATTTATTA ATGTCCGCAG ACGCAATAGA TAACGATGGT CAAATAGCTT ATGTCGAGTT TTATGTTGAT AGCGAACTGG TTTTTACAGA CAGTTCAGCG CCTTTTGAAC ACTTATGGAC AGCAACAAAG GGAACGCATC GTTTTAAAGC AAAAGCGATC GATAATGATG AACAGTCAAG CATCAGCCAA GAAAGTATCT TAACCATCAC GGAACCATCT AGCGGTGGTT GTGCAGGCTT ACCTCAATAC AAATCAGGAA CGGCTTACAC TCAAGGCGAT GAAATACAAA ATATTAATCA AAAATATCGT TGTGATGTCG GTGGCTGGTG TTCTTCTTCA TCTGATTGGG CGTATGCTCC AGGCACAGGC TCAAGCTGGC AAGATGCATG GACAGGGCTA GGCGTTTGTA GCACTCCACC AGAGGTCGCC ATTACTTCAC CAAGTGATAA CAGCGTCATT CTTGCAGGAT CGTCCATTAT AATAAATGCC ACCGCAAGCG ACAGTGATGG CAGCATTGTT GGCGTAGAAT TCTTTGCAAA TGACATGACA CTAGGCGCTG ATACTCAAGC CCCTTATTCC ATGACTTGGA CTGCCGCCTT AATTGGAAAT AACACACTAA AAGCCGTAGC AACCGATAAT GAAGGAAATA ACAGTGACAA TAGTATTCTT GTTACTGTCA GTGATCAAAA CGTAGTGACA AGTCTAACTT CCCCTGCATC TGGATCGAGC CTTGCCTTAG GAAAAGTTAC TCAACTAAGT GCAACCGCAA CTTCATTAAC CAGCTCGATA ACTCAGGTTG ATTTCTTAAT TAATGGGGCA ATCGTTGGGT CAGACACAAC AACACCATAC AATACCAATT GGACACCAAG TGCTATTGGT TCTTACTCCA TTTCAACAGA GGCCACTGAT GCCCAAGGAA ATAAAGCACT CTCAATAGCA TCAAGTATTG CCGTTCTAGA ACAAAGCCAA GCAACGCATA AATTAATTGG TTATTGGCAT AATTTCGTTA ACGGTTCTGG TTGCCCTATT CGTTTATCGG AAATGCCTGA TGAGTGGGAC GTTATCGATA TTGCATTTGC TGATAATGAT AGAAACAGCA ACGGAACGGT GCATTTCAAC CTCTACTCTG GCGATATTCA CAGTAGCTGT CTCGCTCTAG ATCCTAATCA ATTTAAACAA GACATGGCCG CGTTACAGGC AAAAGGAAAA ATATTTGTAC TTTCTCTTGG TGGTGCAGAA GGCACAATAA CCTTAAATAC AGAACAAGAT GAAGCCAATT TTGTCAGTAG TTTAACCGCA CTTATTGATG AATGGGGCTT TGATGGGCTA GATATCGATT TAGAAAGCGG ATCGAATTTA CTTCATGGCA CACAAATTCA AGCTCGCTTA CCTACGGCAC TAAAACAAAT AGAAATGAAT ATGGGCGGAG ACATGTATTT AACCATGGCG CCAGAACATC CTTATGTTCA AGGTGGAATG GTTGCTTACA GCGGTATTTG GGGCGCTTAT ATTCCAGTAA TAGACCAAGT TCGAGATACA TTAGATCTTC TTCATGTTCA ATTATATAAC AATGGCGGAT TAGCAAACCC ATACATGCCA GGAGCGGCTC CAGAAGGATC CGTTGATATG ATGGTAGCGT CGGTAAAAAT GCTCGTTGAA GGGTTTGAAC TCGCTGATGG CTCTTTCTTT GCTCCACTAA GAGATGATCA AGTCGCTATT GGTCTACCTT CAGGGCCAAG TTCAGCAAAC TCCGGACAAG CGCCAACACA AAACATTATA GATGCATTAG ATTGTGTCAC TTATGGCTCA GCATGCAGCA CCGTTGTTCC AAATAAATTA TACCCGAATT TTGGTGGTGT GATGACATGG TCAATTAACT GGGATAAACA TGATGGGTTT AATTTCTCAC AACCGATTGG CGAGAAACTG ACATTAATGA ACGCTCAATA A
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Protein sequence | MKRIFINSAI ASALFISYGA NAFDCSSLPL WQNSEPYSGG AEIQQNQIAY QAQWWSQGNS PETHSGEWQK WKRLGQCDNS GGNTAPTLSI ISPLNNAAIA EGSAITLQAN AVDSDGEITR VEFLADSQSI TIITAPPYNT DWVALKNTTS ISVIATDNEG SSTTESVSIR VQSTGDLIPP SIQLLSPTGN EVLSVGDDLL MSADAIDNDG QIAYVEFYVD SELVFTDSSA PFEHLWTATK GTHRFKAKAI DNDEQSSISQ ESILTITEPS SGGCAGLPQY KSGTAYTQGD EIQNINQKYR CDVGGWCSSS SDWAYAPGTG SSWQDAWTGL GVCSTPPEVA ITSPSDNSVI LAGSSIIINA TASDSDGSIV GVEFFANDMT LGADTQAPYS MTWTAALIGN NTLKAVATDN EGNNSDNSIL VTVSDQNVVT SLTSPASGSS LALGKVTQLS ATATSLTSSI TQVDFLINGA IVGSDTTTPY NTNWTPSAIG SYSISTEATD AQGNKALSIA SSIAVLEQSQ ATHKLIGYWH NFVNGSGCPI RLSEMPDEWD VIDIAFADND RNSNGTVHFN LYSGDIHSSC LALDPNQFKQ DMAALQAKGK IFVLSLGGAE GTITLNTEQD EANFVSSLTA LIDEWGFDGL DIDLESGSNL LHGTQIQARL PTALKQIEMN MGGDMYLTMA PEHPYVQGGM VAYSGIWGAY IPVIDQVRDT LDLLHVQLYN NGGLANPYMP GAAPEGSVDM MVASVKMLVE GFELADGSFF APLRDDQVAI GLPSGPSSAN SGQAPTQNII DALDCVTYGS ACSTVVPNKL YPNFGGVMTW SINWDKHDGF NFSQPIGEKL TLMNAQ
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