| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0749 |
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| Symbol | |
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| ID | 6989272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 835973 |
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| End bp | 837457 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643379148 |
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| Product | putative transglycosylase |
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| Protein accession | YP_002262265 |
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| Protein GI | 209694337 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCCACA TCCGATATTA TCGTCTTCTA AAATCTTGCC TGGTTATTTC TACGCTTGTA
TTTACCTTAA CGGGTTGCCA AGTAGAATCA GAACCAAAAA CAAAACTAGA GCAAGTAAGA
GAACGTGGCA TCTTAAGAGT CAGTACATTA AACAATCAAC TCTCTTATTA TATTGGCTCG
AACGGTCCTA CAGGGCTTGA TTATGATCTT GCGAAAGCCT TTGCTGAAAA GCTAAATGTA
AAACTAGAAA TCACGCCTGC TTATACGTAT TCAGGTTTAT TCCCAGCGCT AAACCGCAAC
GAACTCGATA TTGTTGCCGC TAATATGACC ATTACCCCTG AACGTCTAGA AAACTTTCGT
ACCGGACCAA TTTATTATTA TGTTAGTCAA CAGGTCGTGT ATAAAAAAGG GAACTGGCGC
CCTCGAAATA TCAAAAACCT CACAGAATTA GATGAAAACT TAACGATTGT GAAAGATTCT
AGTTTTGAAG GCACTTTATT AAAATTAAAA GAAAAATATA AAAAATTAGA ATGGTCTACA
GAAGATAATA CGGATGTAAG TGAACTATTA AAACAAGTCG CACGCGGTGA AATACATTAC
ACCTTAGCCG ATTCGGTTGA ACTGTCTCTT ACCCAACGAA TTCATCCCGA TCTCGCTGTC
GCTTTTGAGT TAACCGAAGA TCAACCTATC GCTTGGTTCT TACAAAAAAC AGAAGACGAT
AGCCTTCAGG CATTATTGAT TGAGTTTTTT GGTGAGCTAA AAAGCAGTGG TAAATTAGCA
TTACTAGAAG AAAAATATTT TGGTCACGTA GAAACGTTCG ATTACGTTGA TACACGTGCT
TTCATTCGTT CACTAGAAAG TAAGTTACCG AAATGGGAAC CTTTATTTAA AAAATACGCC
GGGGATTTTG ATTGGCGTTT CTTAGCCGCT CTCTCATACC AAGAATCACA TTGGAACCCT
GTTGCTAAAT CTCCTACAGG TGTGCGTGGC ATGATGATGC TCACCTTACC AACGGCTCAA
TCTGTTGGGG TTAAAAATCG ATTAGATCCA GAAGAAAGCA TTCGCGGGGG AGCTGAGTAT
TTACGTCGTA TAGTAAAACG TGTACCAGAT TCAATTACCG AACATGAGAA AATTTGGTTT
GCCTTAGCGT CTTATAACAT TGGTTTCGGA CACATGATGG ACGCCCGTCG TTTAACACAA
CGATTAGGGG GGGATCCTAA CTCATGGACA GACGTAAAAG ACAATTTGCC TTTGTTACGC
CAGAAACGTT ATTACAAATA CCTTCGCTAT GGATTTGCTC GTGGTGATGA AGCTCAAAAC
TACGTTGAAA ATATCCGTCG TTATTACCAA AGTATTATTG GTTATGAACA AGAACAAGCA
AACAAATTAA TCCAAGAAGA TATCACTGTT GAAGATTTAA CTGTCATTGA TGTTCCATTG
TCATCAGCAA CGTCTACGAC AAGCCACGCA GTTTCAAGTC AGTAA
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| Protein sequence | MSHIRYYRLL KSCLVISTLV FTLTGCQVES EPKTKLEQVR ERGILRVSTL NNQLSYYIGS
NGPTGLDYDL AKAFAEKLNV KLEITPAYTY SGLFPALNRN ELDIVAANMT ITPERLENFR
TGPIYYYVSQ QVVYKKGNWR PRNIKNLTEL DENLTIVKDS SFEGTLLKLK EKYKKLEWST
EDNTDVSELL KQVARGEIHY TLADSVELSL TQRIHPDLAV AFELTEDQPI AWFLQKTEDD
SLQALLIEFF GELKSSGKLA LLEEKYFGHV ETFDYVDTRA FIRSLESKLP KWEPLFKKYA
GDFDWRFLAA LSYQESHWNP VAKSPTGVRG MMMLTLPTAQ SVGVKNRLDP EESIRGGAEY
LRRIVKRVPD SITEHEKIWF ALASYNIGFG HMMDARRLTQ RLGGDPNSWT DVKDNLPLLR
QKRYYKYLRY GFARGDEAQN YVENIRRYYQ SIIGYEQEQA NKLIQEDITV EDLTVIDVPL
SSATSTTSHA VSSQ
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