| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0741 |
|---|
| Symbol | |
|---|
| ID | 6986630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | - |
|---|
| Start bp | 827315 |
|---|
| End bp | 828592 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643379141 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002262258 |
|---|
| Protein GI | 209694330 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3681] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCTA CCTGGAAGCA ATACATTACT ATTTTAAAAA ATGTCGTGAA GCCTGCTCTT
GGCTGTACTG AACCTATTTG TGCGGCCTAT GCAACAAGCG TAGCAACGCA AATGCTAGGA
GAAAAAGCAG AAACGATTGA TGTTTTTGTC TCTGATAATT TGTATAAAAA TAGTATGGGT
GTTTTTGTTC CAAGAACAGG TAGAGTTGGT CTTGCCATTG CTGCTGCTGC TGGGGCTACA
GGTGGAAACC CTGAAGCAGG TTTAGAAGTT CTTGCTAAAC TGACGCAATC CCAAGTAAAT
GAAGCGCAAC AACTTATTGA TGCTGGCCGA GTTCAAGTAA AACGAGAAAC TACAGATGAG
TTCATTTATT GTCGTGTTGT AGTTAAAGGC TCACAACATC ACGCAGAAGT CACCATCAGT
GGGGGTCACA CTCTCATTGT AGAAAAACGA CTTGATGATA ATGTTATTTT TTCCCTTGAT
TCTTCATTAC CAAAAGCCTC TACCGCTTCT ATTTGTGATG GTGTAGATAT CACTATTTCA
TCCATTTATG ACTTTGCAAC TCACGCTGAA TTCGATGACA TTAAATTTAT TCTTAAAGCT
AAAGATCTCA ATATTGCACT AGCTCAAGAA GGACTAAAGA ACCCATACGG CTTAGAAGTG
GGTCGAACTT ATCAAAAGAA CATAGATACT GGTTTACTTT CAAAAAGCTT AGACAGTGAT
ATTTTAATTT ATACCTCTGC CGCGTCCGAT GCTCGAATGG GTGGTGCAAA TTTACCAGCC
ATGTCTAATT ATGGCAGCGG AAACCAGGGT ATAGCAGCTA CGATTCCTGT AGTAAAAATG
GCTGACTTTT ATAATGCCGA CGAAGAAACA TTGGCAAGAG CATTCATAAT GAGTCATCTC
GGTGCTATTT ATATTAAATC TCATTATCCT CCACTATCCG CTTTTTGTGG CAACGCAGTA
ACCTCTGCGG CTGCAGCAAT GGCAATGGTC TATTTAGCGG GGGGGTCATT CGAACAATCT
TGTTCAGCAA TACAAAATAC CATCAGTGAC ACCAGCGGTA TGATCTGCGA TGGTGCAAAA
TCGACTTGTG CGATGAAAGT AGGCAGTAGT GCCCAATCAG CAATGAAATC ATCCCTACTT
GCCTTAAATA ATCATTGTGT AACGAAACAG GGTGTTATTG CTGAAGATGT AGAAAAGACC
ATTAAAAACA TAGGCAGAAT GATAACAACC GGAATGCCAA ATATTGATCA TGAAATCATT
GAAATAATGG CGTCATAA
|
|---|
| Protein sequence | MNSTWKQYIT ILKNVVKPAL GCTEPICAAY ATSVATQMLG EKAETIDVFV SDNLYKNSMG
VFVPRTGRVG LAIAAAAGAT GGNPEAGLEV LAKLTQSQVN EAQQLIDAGR VQVKRETTDE
FIYCRVVVKG SQHHAEVTIS GGHTLIVEKR LDDNVIFSLD SSLPKASTAS ICDGVDITIS
SIYDFATHAE FDDIKFILKA KDLNIALAQE GLKNPYGLEV GRTYQKNIDT GLLSKSLDSD
ILIYTSAASD ARMGGANLPA MSNYGSGNQG IAATIPVVKM ADFYNADEET LARAFIMSHL
GAIYIKSHYP PLSAFCGNAV TSAAAAMAMV YLAGGSFEQS CSAIQNTISD TSGMICDGAK
STCAMKVGSS AQSAMKSSLL ALNNHCVTKQ GVIAEDVEKT IKNIGRMITT GMPNIDHEII
EIMAS
|
|---|
| |