| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0730 |
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| Symbol | hisS |
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| ID | 6988728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 813694 |
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| End bp | 814968 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643379130 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_002262247 |
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| Protein GI | 209694319 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGTGG CTAAAGCAAT CCAAGCAATT CGAGGCATGA ATGACTGCCT TCCAACACAG
TCGCCATTGT GGCACAAAGT AGAAGACAGC GTAAAACGCG TTATTAGTGC GTATGGCTAT
AGCGAAATTC GCATGCCGAT TGTTGAACAG ACGCATCTAT TTAAGCGTGC TATCGGTGAA
GTTACAGACG TTGTTGAAAA AGAAATGTAT ACGTTTGACG ACCGTAATGG TGATAGCTTA
GCGCTTCGTC CAGAAGGTAC TGCAGGTTGT GTACGTGCAG GGATTGAGAA TGGTTTGTTG
TACAACCAAG AACAACGTTT ATGGTACATG GGACCAATGT TCCGTCATGA ACGCCCTCAA
AAAGGTCGTT ACCGTCAATT CCACCAAGTA GGTGTTGAAG TTTTCGGACT GAACGGTCCT
GACGTTGATG CTGAACTTAT CATGATGACA GCACGCTTGT GGCGTGAGCT AGGTATTGAT
AAGCACGTTC ATTTAGAGCT TAACTCAATT GGTTCATTGG AAGCTCGTGC TAACTATCGT
GTGGTATTAA TTGAATTCCT AGAACAACAT TTAGATATCT TGGATGAAGA TTGTAAGCGT
CGTATGTACA CTAACCCAAT GCGTGTTCTT GATACTAAAA ACCCAGCAGT ACAAGCTATT
TTAGGTGATG CGCCTAAGCT GTCTGAGTAT TTAGATGATG ATTCAAAAGC ACATTTTTCT
GGATTATGTG AACTACTTGA CGCTGCTGGC ATCCAATATC AAGTTAATGA ACGCTTAGTT
CGTGGTTTAG ATTATTATAA CCGTACTGTT TTTGAGTGGG TAACTGAAAG TTTAGGCGCT
CAAGGTACGG TATGTGCTGG TGGTCGTTAC GATGGATTAG TTGAGCAATT GGGTGGAAAA
GAGACTTCAG CAGTTGGCTT TGCTATGGGA CTTGAACGTT TAGTTCTTTT AATGGAAACA
TTAGAATTAA CAGACGTACG CCGCTCAGTT GATATTTATA TGGTGACTTC TGGAGCAGAC
ACATTAATGG CTGGTATGAA ACTGGCTGAA CGACTGCGTG AACAGGTTCC TGGATTACGA
GTAATGTGTC ACTTCGGTGG TGGTAATTTT AAAAAGCAAT TTAAACGTGC AGACAATGCG
GGTGCAGCGG TAGCTCTTAT TTTAGGTGAG AGTGAAGTTG CAGAGCTAAC TGTAAACGTA
AAAGATTTAC GTACTGGTGA GCAAGAGACA TTCGCTCAAG CAGACGTATT CGCAAAATTA
GCAGAATTGA TTTAA
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| Protein sequence | MNVAKAIQAI RGMNDCLPTQ SPLWHKVEDS VKRVISAYGY SEIRMPIVEQ THLFKRAIGE
VTDVVEKEMY TFDDRNGDSL ALRPEGTAGC VRAGIENGLL YNQEQRLWYM GPMFRHERPQ
KGRYRQFHQV GVEVFGLNGP DVDAELIMMT ARLWRELGID KHVHLELNSI GSLEARANYR
VVLIEFLEQH LDILDEDCKR RMYTNPMRVL DTKNPAVQAI LGDAPKLSEY LDDDSKAHFS
GLCELLDAAG IQYQVNERLV RGLDYYNRTV FEWVTESLGA QGTVCAGGRY DGLVEQLGGK
ETSAVGFAMG LERLVLLMET LELTDVRRSV DIYMVTSGAD TLMAGMKLAE RLREQVPGLR
VMCHFGGGNF KKQFKRADNA GAAVALILGE SEVAELTVNV KDLRTGEQET FAQADVFAKL
AELI
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