| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0729 |
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| Symbol | ispG |
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| ID | 6986624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 812541 |
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| End bp | 813659 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643379129 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_002262246 |
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| Protein GI | 209694318 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATATAG AGTCTCCAAT TAAACGTCGC CAATCTACTC GCATTTATGT GGGTAATGTT
CCTATTGGTG ATGGCGCACC AATCGCTGTT CAGTCTATGA CGAATACGTT AACAACTGAT
GTTGCTGCTA CCGTTGCACA AATTAATGCA CTTCAAAAAG TCGGCGCTGA TATTGTTCGT
GTTTCAGTGC CAACAATGGA TGCGGCAGAA GCCTTTAAGT TGATTAAACA ACAGGTTTCG
GTTCCATTAG TTGCTGATAT CCATTTTGAT TATCGTATTG CATTAAAAGT TGCGGAATAT
GGCGTGGATT GCTTACGTAT TAATCCCGGT AATATTGGTA ATGAACAACG AATTCGTTCT
GTTGTCGATT GTGCAAGAGA TAATAATATT CCGATTCGTA TTGGTGTGAA TGGCGGTTCA
TTAGAAAAAG ACATTCAAGC TAAATATAAA GAACCGACAG CAGAAGCATT ACTAGAGTCC
GCAATGCGCC ATGTCGATAT ATTAGATCGT ATGAACTTTG ACCAGTTCAA GGTCAGTGTC
AAAGCTTCTG ATGTCTTTTT AGCTGTCGAT TCTTATCGTT TGCTAGCAAA ACAGATAGTG
CAACCATTGC ACCTTGGAAT TACCGAGGCA GGTGGTGCTC GTGCGGGTTC TGTTAAATCA
GCCGTTGGTT TAGGTTTATT ATTATCAGAA GGCATTGGCG ACACATTACG TATTTCGCTA
GCGGCAGATC CTATTGAAGA GATCAAAGTT GGTTTTGACA TCTTAAAATC ATTACGAATT
CGTTCTCGTG GTATTAATTT TATTGCGTGC CCAACTTGTT CTCGTCAAGA GTTTGATGTT
ATTGCTACGG TTAATGAGCT TGAACAGCGT TTAGAAGACT TAATCACACC AATGGATGTA
TCTTTGATTG GTTGTGTCGT TAATGGCCCT GGCGAGGCGG AAGTGTCTCA TATGGGAATT
GCGGGAAGTT ATCGTAAAAG TGCATTCTAT GAAGATGGGA TTCGTCAAAA AGAACGTTTT
GATAACGACA ATATCGTGGA TAAGCTAGAA GCTAGGATCC GTGCAAAAGC AGCGATGTTA
TCAAAAGAAA ATCAAATTGA TATTAATCAG ATCGACTGA
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| Protein sequence | MHIESPIKRR QSTRIYVGNV PIGDGAPIAV QSMTNTLTTD VAATVAQINA LQKVGADIVR
VSVPTMDAAE AFKLIKQQVS VPLVADIHFD YRIALKVAEY GVDCLRINPG NIGNEQRIRS
VVDCARDNNI PIRIGVNGGS LEKDIQAKYK EPTAEALLES AMRHVDILDR MNFDQFKVSV
KASDVFLAVD SYRLLAKQIV QPLHLGITEA GGARAGSVKS AVGLGLLLSE GIGDTLRISL
AADPIEEIKV GFDILKSLRI RSRGINFIAC PTCSRQEFDV IATVNELEQR LEDLITPMDV
SLIGCVVNGP GEAEVSHMGI AGSYRKSAFY EDGIRQKERF DNDNIVDKLE ARIRAKAAML
SKENQIDINQ ID
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