| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0727 |
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| Symbol | |
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| ID | 6986622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 810887 |
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| End bp | 811648 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643379127 |
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| Product | putative type 4 fimbrial biogenesis protein PilF |
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| Protein accession | YP_002262244 |
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| Protein GI | 209694316 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAT GGAGTGCAGC ATGGTTAGCA ATTGGATTGT TAACCAGTGC CGGTTGTGTC
ACGGTTAATG AAGCCGATGA GATGACCGAC GATGAGATAA TTCGAGCTTC CGAAGCTCGA
ATTACTCTCG GATTAGGTTA CTTAAATGCG GGCAATATGA TGAAGGCCCG TGAGAATTTG
GAACTGGCTG CACAATATGC TCCTGACTAC TACCGCTCTC AAACTTCCCT CGCTTATTAT
TATCAACAAG TAGAAGAAAA TGAATTAGCT GAAAAGGCTT ACAAACGAGC ATTACGTTAT
TCATCAAAAA ATGGTAATGT ATTAAACGAC TACGGGGTTT TTCTCTGTAG AAAAGGCCGT
TATGAGGAAG CACAGCAAAA GTTTACTCTG GCAATTGAAC AACCTTATTA CTATTTAGTG
TCAGCAAGCT ATGAAAATGC AGCGATGTGC GCCCTAAGTA GTGGAGATAA CGTAACAGCA
AAAACGTATT TTGAGCGTTC ACTCGCTCAC GATCCCCATC GAGTTCGTTC CACCCTTCAA
TTGGCTAAAT TGAATATTGA TGAAGGCAAC TATTCAGAAC CGAGGATTTC GCTGTTTAAA
TTTAATAAGA AGTACGGATA TAAACCCGTT AGCCTAAGCT TACTCATAGA ATTAGAAAAA
AAAGCAGGCA ATGCACATTT GGTTACTAAA TATGCAAACA TTTTGGGACA AAAATATCCG
GACTCCAAAG AATATCAGAC CTATATAAAT CATGACTATT GA
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| Protein sequence | MIKWSAAWLA IGLLTSAGCV TVNEADEMTD DEIIRASEAR ITLGLGYLNA GNMMKARENL
ELAAQYAPDY YRSQTSLAYY YQQVEENELA EKAYKRALRY SSKNGNVLND YGVFLCRKGR
YEEAQQKFTL AIEQPYYYLV SASYENAAMC ALSSGDNVTA KTYFERSLAH DPHRVRSTLQ
LAKLNIDEGN YSEPRISLFK FNKKYGYKPV SLSLLIELEK KAGNAHLVTK YANILGQKYP
DSKEYQTYIN HDY
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