| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0724 |
|---|
| Symbol | pepB |
|---|
| ID | 6986621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Aliivibrio salmonicida LFI1238 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011312 |
|---|
| Strand | + |
|---|
| Start bp | 807699 |
|---|
| End bp | 808985 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643379124 |
|---|
| Product | aminopeptidase B |
|---|
| Protein accession | YP_002262241 |
|---|
| Protein GI | 209694313 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0260] Leucyl aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACAGA AGATGACAGT ACAACTTTCA AATACAAAAG CTCTTGCTCA TTGGGGGAAT
AACGCACTGC TTTCATTTAC CACAGAAGGC GCCGTCATTC ATAATACTGA CAATGATGTA
TACAGTACGG TTCAACGTGC TGCACGAAAG TTAAATACTC AAGGTATTGT TGATGTAGCT
TTGGATGGCG CGTCATGGGA TCTCGAATCT ATTTGGTCTT TTATTCAAGG CTTCCGTGGT
TCGAAAAGTA ATAATGATAT CGCTTGGAAC TCACTCTCAG ATCATGACGA AAAAGAATTA
AATGCACGTA TTTTAACGAC CAACTGGACC CGTGACATTA TTAATAAAAC GGCAGAAGAA
GTTGCCCCAC GCCAGTTGGC GAGTATGGCT GCCGAATTCA TTAAATCAGT TGCTCCGGAA
GGAACGGTAA AAGCTAAAAT TGTAAAAGAT AAAGATCTTT TAACGGAAGG ATGGACGGGA
ACATATGCCG TTGGTCGTGG TTCAGAACGT ACGTCTGCGA TGCTGCAATT AGACTACAAC
CCAACGGGTG ATGAAAATAC GCCTGTATAC GCTTGTCTTG TAGGTAAAGG CATTACGTTT
GATTCTGGTG GTTACAGCAT TAAACCTTCA GGTGGCATGG CATCAATGAA GGCTGACATG
GGCGGAGCTG CGCTTGTTAC TGCAGGTCTT GCAATGTCGA TTCTTCGTGG TTTAGATAAG
CGCGTTAAGC TAATTCTATG TTGTGCTGAA AATATGATTT CAGGCCGAGC TTTAAAACTG
GGTGATATCA TTACCTATAA AAATGGCAAA ACAGTTGAGA TTTTGAATAC AGATGCAGAA
GGACGTTTAG TCTTAGCGGA TGGCCTTCAA TTTGCTTCTG AGCAAACCCC CGAATTAATT
ATCGATTGTG CAACGCTAAC GGGATCCGCT AAAATGGCGG TTGGTAATGA TTTTCATTCA
TTATTGAGTT TTGATGAAAA GTTAAGCCAG CAAGCATTAA TTTCAGCTCA AGAAGAGAAC
GAAGGTTTAT GGCGTTTGCC GTTAATGGAA TTTCATCGTG AGATGTTGCC TTCTAATTTT
GCTGATTTAG CGAATATTGG TTCTGGAGCC TATTCACCAG GCGCAAGTAC GGCCGCGGGT
TTTCTTTCTT ATTTTGTTGA TGATTATAAG AAAGGCTGGT TGCATATGGA TTGCTCTGCA
ACTTACCGAA CCGCTCCCTC AGACAAGTGG TCTGCAGGGG CAACGGGTGT CGGTGTAAGA
ACATTAGCGA ACATTCTTAC AAAATAA
|
|---|
| Protein sequence | MSQKMTVQLS NTKALAHWGN NALLSFTTEG AVIHNTDNDV YSTVQRAARK LNTQGIVDVA
LDGASWDLES IWSFIQGFRG SKSNNDIAWN SLSDHDEKEL NARILTTNWT RDIINKTAEE
VAPRQLASMA AEFIKSVAPE GTVKAKIVKD KDLLTEGWTG TYAVGRGSER TSAMLQLDYN
PTGDENTPVY ACLVGKGITF DSGGYSIKPS GGMASMKADM GGAALVTAGL AMSILRGLDK
RVKLILCCAE NMISGRALKL GDIITYKNGK TVEILNTDAE GRLVLADGLQ FASEQTPELI
IDCATLTGSA KMAVGNDFHS LLSFDEKLSQ QALISAQEEN EGLWRLPLME FHREMLPSNF
ADLANIGSGA YSPGASTAAG FLSYFVDDYK KGWLHMDCSA TYRTAPSDKW SAGATGVGVR
TLANILTK
|
|---|
| |