Gene VSAL_I0720 details

Gene Information

• Locus tag: VSAL_I0720
• Symbol: hscB
• ID: 6988721
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Aliivibrio salmonicida LFI1238
• Kingdom: Bacteria
• Replicon accession: NC_011312
• Strand: +
• Start bp: 804387
• End bp: 804902
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 643379120
• Product: co-chaperone HscB
• Protein accession: YP_002262237
• Protein GI: 209694309
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1076] DnaJ-domain-containing proteins 1
• TIGRFAM ID: [TIGR00714] Fe-S protein assembly co-chaperone HscB

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCATT TTGAATTATT TGGGCTACCA AACCAGTTTG AACTGGATGG TGGCCTTCTT 
TCTGCTCAGT TCCTTGAATT GCAGAAACGA TTCCACCCCG ACAATTTCGC GACCTCTTCA 
GAGCGTGACC GCTTGCTTTC CGTTCAAAAA GCGGCACAAA TCAACGACGC TTATCAAACG 
CTTAAAAATC CAGTCACTCG TGCAGAGTAT ATATTATCAG AGCAAGGACA TGACATTCGT 
GGTGAACAAA CCACAATGCA AGATCCTATG TTTCTAATGC AACAGATGGA GTTACGAGAA 
GATCTCGAAG ACTTGCTATC AAGTTCAGAT CCTGAAAGTG CACTGTTTGA TTTTTCAGAA 
AATGTTTCTG CAATGCGTAA AACTCAATTA GCTGAATTAA AGCAGCAATT AGAATCAGAG 
TTATGGCAAG AAGCGGCACA AAGCGTTCGT AAACTTAAGT TTATTGATAA GCTAAACCAA 
GAAGTCGAAA AGTTAGAAGA TAAATTATTA GGTTAA 

 

Protein sequence

MNHFELFGLP NQFELDGGLL SAQFLELQKR FHPDNFATSS ERDRLLSVQK AAQINDAYQT 
LKNPVTRAEY ILSEQGHDIR GEQTTMQDPM FLMQQMELRE DLEDLLSSSD PESALFDFSE 
NVSAMRKTQL AELKQQLESE LWQEAAQSVR KLKFIDKLNQ EVEKLEDKLL G