| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0715 |
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| Symbol | yfhQ |
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| ID | 6989268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 800930 |
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| End bp | 801658 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643379115 |
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| Product | hypothetical tRNA/rRNA methyltransferase |
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| Protein accession | YP_002262232 |
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| Protein GI | 209694304 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAGATA GAATTCGTAT TGTCCTTGTT GGTACTAGCC ATTCAGGAAA CATTGGGTCA
GCGGCTCGTG CCATGAAAGT AATGGGCTTA ACTAATATGG TATTAGTTGC GCCTGAATGT
GAAGTTGATG GTCAAGCCAT CGCATTAGCT GCCGGTGCAA GTGATATTGC GAATCGAGCG
CGTATTGTTA GTACATTAGA TGAAGCTATC TCTGATTGTG GTTTAGTTAT TGGTTCAAGT
GCTCGTTCAA GAACACTCGA ATGGCCAATG TTAGAACCAA GAGAAGCGGG CGTCAAAGCA
ATAGAAGAAG CGCCGTCTCA TCCTATTGCG TTTGTATTTG GTCGAGAAAG AGTTGGATTA
ACCAATGAAG AATTACAGAA ATGTCATTTT CATGTATGTA TTCCAGCAAA TCCTGAATAC
AGCTCATTAA ATTTAGCCAT GGCAGTGCAA ACAATTAGTT ATGAAGCGCG TGTTGCTTGG
TTAGATAGTC AGGCGTATAA AGGTGAATCT AAAGAAGCGG AATATCCTTT AAATAACGAA
TTAGAATTAT TCTATGAGCA CCTTGAAAAA GTGATGATGG ATACCGACTT TATTAATAAG
GCTCATCCAG GACAAGTAAT GAATAAGATG CGCCGCATGT TTAATCGTGC TCGTCCTGAG
ATTCATGAAT TACGTACATT ACGCGGTATA TTAACTGCGG TAGAAAGAAG CTCAAATATT
AAAAAATAG
|
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| Protein sequence | MLDRIRIVLV GTSHSGNIGS AARAMKVMGL TNMVLVAPEC EVDGQAIALA AGASDIANRA
RIVSTLDEAI SDCGLVIGSS ARSRTLEWPM LEPREAGVKA IEEAPSHPIA FVFGRERVGL
TNEELQKCHF HVCIPANPEY SSLNLAMAVQ TISYEARVAW LDSQAYKGES KEAEYPLNNE
LELFYEHLEK VMMDTDFINK AHPGQVMNKM RRMFNRARPE IHELRTLRGI LTAVERSSNI
KK
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