| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0696 |
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| Symbol | |
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| ID | 6986607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 781864 |
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| End bp | 783426 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643379095 |
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| Product | hypothetical protein |
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| Protein accession | YP_002262213 |
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| Protein GI | 209694285 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.207234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAAG TATCCATTGT TGCCTCAGAG TTAAGCCAAT TAAAGCAACA ATTAGATCAA
ACGCGCTTAT CACACCGTGA CACCTCGTTG AAATCACGCC GTGAAATTTT GTTGCTTAAA
CGCATTATTT TGCGATTTTG TGCTGCGTGT AAACATCATG ATAGCGATCT GGATAAAGAA
ATAATTGAGC TTGCTCATGA TATTGAACAT ATCGAAAACA CCTCAGATTT AACCGTCCGT
ATTGCAACTT TTGAACGCTT AATTAACCGC TATCAATTAA ATGTCCAAAA AGAACATTCA
GTAATGGAAG AACATATTTC TTATTGTGGC GAGACATTAC AGCGTGTTGT TGGATTGCCG
ACAGGTTTAA AAAGAGACTT ACGTAATCTA CTTAGGCATC CATCTCAAGA TGGAACTAAA
CATATCCAAC GTATTGTTCG CCTTATTGAG CTGTACGAAA GAGCAATTAA GTTTATTTCA
GCGGGTAGCG TCTCTTCCGA AATCAATGCC AATGAAATCA TTGATGTTGA TACTCAAGAG
CAATTAAGTA ATGAATTGCA ACACCTGATC TCAGAGCTTG ATTTCAATAA CACCTCCGGT
GAAGACCTCC TTGATATCAG AAATAAACTG CTCACTGGCG TTGATGCTGT ATCTCTAATT
GATTTAGCCC TACAAACGTT ACAACTCGTT CTTCAAGGCA CAAATAAAGA ACGTAAAGCA
TCCCAAGTCT TTGTTGGTGA GATGAACACT CAAGTGGCTC AAATCATAAA AACGAGTGAG
CAAAACCAAG AACAAGGCCA ATCTTATTTA GATCAACGTT CATTATTAAA TGAAGAATAT
GGCCTTTTAA TCAAACAAGC CGAAAACATT CTAGAAAGTA AAATAAGCGC ACAAGAACAC
AAAACAAAAA TGTCGTTATT GCTCAATGAA ATGAGCGATC TTGCAGAGCG AAATAAAGCC
ATGCAGGAGC GAGAAGCCGC ACTAATAGAA CGTCATGAAT ACACAACAAA AAAATTAAAT
AGCGTCTATC AAGAAACTCT AGAATATCGT CGTCAATTAA ACGATCAACA ACAAAGAGTG
TTTAAAGATC CATTAACCAA TGTTTATAAT CGCGCCGCTA TGCATGAACG TTTAGATTTA
GAATATAAAC GCTGGGTCCG TCATCAACAC TCTCTAGTAT TAAGCATGAT AGACATTGAT
CAGTTTAAAC GTATCAATGA GCAATTTGGA CACCTCGCTG GTGATAAAGC ACTTAAAATC
ATCGCAAAAA CCATAGAAAA ACAAGTCTCG AATACTGATT TTGTCGCTCG ATTCAGTGGT
AAAGAGTTTT TAATCCTCTT TACAGAAACC ACGAAAGAAG AACGAGAAAC GGTGCTTAAA
GCGATCCAAG CTGCCATCGC AAAATTACCC TTCAAATTTA AAGGCAATCA CGTTCAAGTC
ACGGTTTCTA TTTGCAGTTC TGAATTTACC AACAGTGATA TTCCTGAAAA AGTCATCGAA
CGATCAGTTC AAGCGCTATA CAAACAAAAA ACCAAAGGCA CTCAACAACG CATTTGTGCA
TAA
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| Protein sequence | MIEVSIVASE LSQLKQQLDQ TRLSHRDTSL KSRREILLLK RIILRFCAAC KHHDSDLDKE
IIELAHDIEH IENTSDLTVR IATFERLINR YQLNVQKEHS VMEEHISYCG ETLQRVVGLP
TGLKRDLRNL LRHPSQDGTK HIQRIVRLIE LYERAIKFIS AGSVSSEINA NEIIDVDTQE
QLSNELQHLI SELDFNNTSG EDLLDIRNKL LTGVDAVSLI DLALQTLQLV LQGTNKERKA
SQVFVGEMNT QVAQIIKTSE QNQEQGQSYL DQRSLLNEEY GLLIKQAENI LESKISAQEH
KTKMSLLLNE MSDLAERNKA MQEREAALIE RHEYTTKKLN SVYQETLEYR RQLNDQQQRV
FKDPLTNVYN RAAMHERLDL EYKRWVRHQH SLVLSMIDID QFKRINEQFG HLAGDKALKI
IAKTIEKQVS NTDFVARFSG KEFLILFTET TKEERETVLK AIQAAIAKLP FKFKGNHVQV
TVSICSSEFT NSDIPEKVIE RSVQALYKQK TKGTQQRICA
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