| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0670 |
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| Symbol | |
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| ID | 6986593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 749107 |
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| End bp | 749622 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 643379070 |
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| Product | hypothetical protein |
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| Protein accession | YP_002262188 |
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| Protein GI | 209694260 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.177225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGCG GGTTTACCTT ATTGGAGATG TTAATTACAA TCACCGTTTT GGCCATACTT
CTATCCGTTG CTGCACCAAA CTTCAATACC GTAAATAACA GCGTAAAAAT GCAACGCTTG
GCAACAGAAC TAAATGGTTT TTTAATTCAA GCTAAATCAG AGGCAGTCCT AAGAAACAGT
GACTTATGGG TCCATATTTC ATTTCCGAAA AAAGAAGAAA ATAAAATCGG TTCATGGAAT
TTAGCTTTAA GAGATTCAAC AAGTACTTCT GGAAATATGG TTGCCTATTT AGATGGTACC
AACTTCAGCG ATATCACCTT AAAACACACA TATGCACATA AAAAAACAAA ATTTGAAGGT
ATAAGAGGTA GACCAGCTTC AGGGTCATTT ACTTTCTACC CAAATACAGA CACAAAAAAA
GTATTGAAAG TCGTTCTTTC AAACCCTCCT GGAAGAATTA AGGTTTGTTA CGATAATACG
AGTGGGGAGC TCTATGGATA TAATTCCTGT TCATAA
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| Protein sequence | MNRGFTLLEM LITITVLAIL LSVAAPNFNT VNNSVKMQRL ATELNGFLIQ AKSEAVLRNS
DLWVHISFPK KEENKIGSWN LALRDSTSTS GNMVAYLDGT NFSDITLKHT YAHKKTKFEG
IRGRPASGSF TFYPNTDTKK VLKVVLSNPP GRIKVCYDNT SGELYGYNSC S
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