| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0658 |
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| Symbol | slt |
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| ID | 6986587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 730675 |
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| End bp | 732609 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643379052 |
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| Product | soluble lytic murein transglycosylase precursor |
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| Protein accession | YP_002262176 |
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| Protein GI | 209694248 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.597018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATATA GCGGACATAA ATTAGGGATG ATGGCGGCGT TATGTATTGG TATGAGTGTG
CATACTGCTG AAGCGTTATC AATTGATGAA TCACGAGTTC AATATCAAGA AGCAAAAGAT
TTACTCACTG AAAAAAAATT CGATGAATAT AAGAAAGTTA GAGCTTCACT GGATGATTAT
CCACTCGCTC CTTATTTAGA CTATCGTGAG CTGAAAATGG ATTTACAGGC CAAAACTCCC
GATGACATTC GACTGTTTAG ACACGCTCAT CAAACACTCG CCATTGGTAA TTCATTAGAT
TATCAATACT TAGTTATTCT TGGTCTTAAT GAGCGTTGGG CTGATTTTGT TGATTATTTT
CCACAAGAAC CGAGCAGTAC AAATTTACAA TGCTATTACT ACCAAGCAAA AAATAAGTTG
GGCGATAAAA AAACAGCGTG GAAAGGCGCT GAAAAATTGT GGTTAACGGG CAGTTCGGTT
ACTTATGAAT GTGATGATTT ATTTAGTGCT TGGAGTGACG CAGGAAAACT GACGGATGAA
CTGATTATTG AGCGTATGTT GTTAGTATAT AAAGCTCGAA ATAATAATTT GTTTTCTTAT
TTAGAAAAAA TGTTGTCTTC AGAGAAAGCA AAAATACAGG CAAAGCATAT TGTTGAGTTA
TTTAATGAAC CTGATTCGTT AAATGAGTAC TCTGCAAAAA ATGAAGCCAC TGAATTTACT
AAGCAACTAA CGCTTATTTC TATAGAAAGA GAAGCAAGAA AAAACCCTAA AAAAGCGATT
GAAATGTTGC CTGAATTAGT GAAAAAGCAA CAATTCAGTT CAGATGAACA TATTGCGATA
AAGAAACGAA TAGTCAGTAG CATCATGTCT ACAGATTCGG CTTCTTTAGC TGCTTGGCGT
GATACTGAGT TAGAAACAAA TCCAGAAGAT TCATTTGTAG AGCGACGAAT TAGGGTTGCA
ATAAGAGCCG CTGATTGGAA TGACGTTAGT AAATGGATCG GTTATTTAAC ACCAAGTGCA
AAAAAATCGT TACGTTGGCA GTTTTGGATT GCTCGTATAG AAAGCGAAGA GGGAAAACAA
TCAGCCGCTG ATGCTCGCCT CAAAAAGCTA CTTGGTCAGC GTGATTTTTA TAGTGTTGCG
GCTGCGAATA TTTTAGGTGA ACCGATTCAA TATTCTATGG ATAAAGCATC AAAGAATACT
AAAGCCGTCG CCGGAAAGTA TAAAAATGAA TTAAATCGAA TTAAAGAACT TATTGCGATT
GATGAAATCT CAACAGCCAA AAGTGAGTGG GAATATTTAT TAGTCCGCTC TTCTAAAAAA
GAAGTAAAGG AGTTAGCAAG CTATGCTGCT CAGCACCGTT GGCATCACTT TACAGTGCTT
GCAACCATTA AAGGGAAGAT GTGGGGTTAC TTAAGTTTAC GATTTCCTAT TGCTCATCAG
TGGTGGTTTG GGCATTACAG TAAAGAGTTG GGTTTAGATA AAATAACGCT TATGTCTTTG
TCTCGCCAAG AAAGTGCGTT ATACGCAGAA GCTCAATCTC CGGTTGGGGC GCGAGGATTA
ATGCAAATTA TGCCAGCGAC GGCAAAATAT ACAGCAAAGA AAATTGATTA TGATAAATAT
GAGGGTGTGA GTAGCCTTAA TAATGTGGAT GTGAATATAC ACATTGGTTC TAATTATCTA
AAAGGATTGT TAGATGATTA TGATGGAAAT CGAATTTTTG CTTTAGCGGG ATATAATGCA
GGACCTCATC GAGTTAAGCG TTGGAGAGCG GTATCTAATG AGAAATTAGA TGCCTATGCC
TTTATTGAAG CGATTCCTTT TAAAGAAACA AGAGGTTATG TACAAAACAT TTTAATGTTT
GAAACGTATT ACCGTAGCTT ACTTGGGGAG AAAGGCCCTT TCTTATCTGT TAAAGAGCTT
AATTTAGAGT ATTAA
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| Protein sequence | MKYSGHKLGM MAALCIGMSV HTAEALSIDE SRVQYQEAKD LLTEKKFDEY KKVRASLDDY
PLAPYLDYRE LKMDLQAKTP DDIRLFRHAH QTLAIGNSLD YQYLVILGLN ERWADFVDYF
PQEPSSTNLQ CYYYQAKNKL GDKKTAWKGA EKLWLTGSSV TYECDDLFSA WSDAGKLTDE
LIIERMLLVY KARNNNLFSY LEKMLSSEKA KIQAKHIVEL FNEPDSLNEY SAKNEATEFT
KQLTLISIER EARKNPKKAI EMLPELVKKQ QFSSDEHIAI KKRIVSSIMS TDSASLAAWR
DTELETNPED SFVERRIRVA IRAADWNDVS KWIGYLTPSA KKSLRWQFWI ARIESEEGKQ
SAADARLKKL LGQRDFYSVA AANILGEPIQ YSMDKASKNT KAVAGKYKNE LNRIKELIAI
DEISTAKSEW EYLLVRSSKK EVKELASYAA QHRWHHFTVL ATIKGKMWGY LSLRFPIAHQ
WWFGHYSKEL GLDKITLMSL SRQESALYAE AQSPVGARGL MQIMPATAKY TAKKIDYDKY
EGVSSLNNVD VNIHIGSNYL KGLLDDYDGN RIFALAGYNA GPHRVKRWRA VSNEKLDAYA
FIEAIPFKET RGYVQNILMF ETYYRSLLGE KGPFLSVKEL NLEY
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